DRSC/TRiP Functional Genomics Resources

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Protein Alignment qin and papi

DIOPT Version :9

Sequence 1:NP_650735.3 Gene:qin / 42236 FlyBaseID:FBgn0263974 Length:1857 Species:Drosophila melanogaster
Sequence 2:NP_608657.1 Gene:papi / 33401 FlyBaseID:FBgn0031401 Length:576 Species:Drosophila melanogaster


Alignment Length:389 Identity:74/389 - (19%)
Similarity:142/389 - (36%) Gaps:91/389 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   391 PYRVTCSRFMDISNIFKCEFVNPNIQVCFKTDLEISRSLSSSPKGE----ITFLTSSSSSKENFD 451
            |..|..:|.:.|..|.:...|        |.:|::.:.|:|...|.    :..:.|||.:|.|.|
  Fly   117 PDAVKAARALLIKEIERAPVV--------KVELQVPQRLASKINGRGGELLQEIRSSSLAKLNID 173

  Fly   452 PHSR----KLLLAQNSK-------------------LKKATQVSQSQKKRGKNATEVAQSSLNST 493
            .:.|    |:.:..|.|                   ::...:|.|.::.|......:|.|..:|.
  Fly   174 LNGRNGKAKITIIGNQKQVNIARKMLDDQIEEDEELVRSMEEVEQRREPRRSPTNSIASSMYSSQ 238

  Fly   494 AAIIDEFPAKDLDFLHNFSSLDITK-RNKTTEDSSDWFKTDTLVRVRSVQSPEDFYVQGIHAAQR 557
            .::......:|        .|..:| ..|..|           |.|.:|.||..|:||.|....:
  Fly   239 TSLSSHTQPRD--------KLMASKGEGKPME-----------VYVSAVASPTKFWVQLIGPQSK 284

  Fly   558 LREELDTFAHTLSD--------SSSVPPTIVVGQNYIIHHKDKDRYYRALVSQKLTN-----ENL 609
               :||:....::.        :..|.....|||......|..:::|||.:...:.|     |.:
  Fly   285 ---KLDSMVQEMTSYYSSAENRAKHVLTAPYVGQIVAAVFKFDEKWYRAEIVDIMPNQYNPKEQV 346

  Fly   610 YNVFLTDIGVHLHVRCSDFRVVPERISHLPYSAVHCSLSELMP--KNGESEWDSKASAFLKQIVQ 672
            .:::..|.|...::..:|...:......|.:.||.|.|:.:..  :.....|...:.|..:::.:
  Fly   347 IDLYFVDYGDSEYISPADICELRTDFLTLRFQAVECFLANVKSTIQTEPITWPKSSIAKFEELTE 411

  Fly   673 NNPVRVIVKKALTYE------------------LHGVDLITSNYDTNISVRDSFLYCGLAISRD 718
            ....|.::.:.:||:                  |.||:|.....::.:::.|..:..|.|:..|
  Fly   412 VAHWRKLIARVVTYKERPRATTAVSAAAKEGTPLPGVELFDPADNSELNIADLMITQGFALPLD 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qinNP_650735.3 zf-RING_5 25..75 CDD:291308
BBOX 139..174 CDD:197662
TUDOR 536..648 CDD:278965 28/124 (23%)
TUDOR 741..859 CDD:278965
TUDOR <805..839 CDD:119391
TUDOR 981..1107 CDD:278965
TUDOR 1296..1403 CDD:278965
TUDOR 1337..1385 CDD:119391
TUDOR 1710..1761 CDD:119391
papiNP_608657.1 KH-I 68..127 CDD:238053 3/9 (33%)
KH_1 138..201 CDD:306517 15/62 (24%)
TUDOR 257..386 CDD:306940 31/142 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452776
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR22948
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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