Sequence 1: | NP_650735.3 | Gene: | qin / 42236 | FlyBaseID: | FBgn0263974 | Length: | 1857 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038949233.1 | Gene: | Rnf17 / 305908 | RGDID: | 1310486 | Length: | 1650 | Species: | Rattus norvegicus |
Alignment Length: | 2077 | Identity: | 413/2077 - (19%) |
---|---|---|---|
Similarity: | 706/2077 - (33%) | Gaps: | 715/2077 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 25 RCPKCSKCFTYLYNTNSEEDNHRPFLLGCGHTLCESCLWNDRLDP------KCAVC--------- 74
Fly 75 --HSPA-------------PPTIVAKRSDCKS-VANLRDLYELNYHVLGRTSSLSYLLPFAKDSA 123
Fly 124 NQSLSPSSISEIVQTVKCSECGNATASGECRQCNAFYCRRCFDAVHKRSRVLKSHIFRNSTEQDS 188
Fly 189 SFSKKLRVGDQYFTL------PSQNLCIHHRMPKDKYCMKCYRSHCQICSTVHHSGHRIRKLIEI 247
Fly 248 NQSYASEIPTTLNSLNMAHIHVLNGKQVVQRAKQKLNDYATETLASISKRFSHLHGLLQVAEL-Q 311
Fly 312 VIEKLRESSLPPQLKLNEAMGQLSGYETVIERLTKSLNSGVGNDMAVPRDVSLRWLLKLICEHLE 376
Fly 377 KIPTTVQVSKVDENPYR--VTCSRFMDISN-IFKCEF------------VNPNIQVCFKTDLEIS 426
Fly 427 RSLSSS--PKGEITFLTSSSS-----SKENFDPHSRKLLLAQNSKLKKATQVSQSQKKRGKNATE 484
Fly 485 VAQSSLNSTA-AIIDEFPAKDLDFLHNFSSLDITK------RNKTTEDSSDWFKTDTLVRVRSVQ 542
Fly 543 SPEDFYVQ---GIHAAQRLREELDTFAHTLSDSSSVPP--TIVVGQNYIIHHKDKDRYYRALVSQ 602
Fly 603 KLTNE------------------NLYNVFLTDIG------------VHL--------HVRCSDFR 629
Fly 630 VV--------PERISHLPYSAVHCSLSELMPKNGESEWDSKASA-FLKQIVQNNPVRVIVKKALT 685
Fly 686 YELHG-------VDL-------ITSNYDTNISVRDSFLYCGLAISR----------DGAPLWLPP 726
Fly 727 APTALRLPRISFRFGDVYMVQMLHVEDPQEFYVMRHDYEKKRLWLQFSLQEAMDRIN-ISQLQNI 790
Fly 791 FLGQ----LHLGCVLQS--------GGQWKRASIEQILPDGYVLVHLVDEGPSQKV-------FW 836
Fly 837 DQLFVLPQKFWDTGLAIKCCLADVE-TRAEHSYTWTPEGTTLFKQLTSNPRLYMDVISCTED-LV 899
Fly 900 YVSLHFERS-NSETTSVGVQLVAHGHCTSSGESSRMITPTVSNRSVRFDEETKKFIAQQKVRPVE 963
Fly 964 LSPYRMPDNTER---NKRTTVNILYVRKPDEFYVTLPHFQKAINNLQKSVQKAAAAMYQNMLPRT 1025
Fly 1026 DWQVGDMCYARVQANCDSQALWYRGVVTGVIPPGITCPIVRYQVHLRDLG-ELIDDVHSSSLANI 1089
Fly 1090 DEADMRISSSAKRCHLHGIRPIG--DEWSKDAIDFFMDQLKAYNEIHVTGRGRT----ENSLSVI 1148
Fly 1149 LWGSLSILTGPFSPATIKY---------VNINKALLMAGMAEKDHNSDSEDDQQSMPENVSVNSE 1204
Fly 1205 EAAKANDWESCLSK-----IDGTSKTNDSLNLIESRSVTVGFEHNEDMPPLALLEDLGNTKNTTG 1264
Fly 1265 ETTPPAGWTTRRKCDKSVFTAIATNVTYECCIYLTLASDKPFIEHMGNLLVREYKPLMDKQKER- 1328
Fly 1329 -----STSYTYKVGQAVVVTYHMDNMIYRGIVQRLENNHNEYTVYYVDYGNMELVKADEMLPYAP 1388
Fly 1389 FPDLNAMCFLVELH----------------------GVRSKQGKYSLKEMDTVHLNLVMKLSGVR 1431
Fly 1432 IVDDETVGPNKIPKCQIKVGNVDIATMMIDSGMS----VPIEKQTIKNNTKYLPSQKFL------ 1486
Fly 1487 --EDFKV-FDELDHLAAGEGELSDKEAP--PTQRKHDSISSVQQPPTKKFLVDQEEV----EAFE 1542
Fly 1543 C-DQDFDCQQAAQKMHLNNNFYLGDFGKYADETTARDEDEPHSNSSKSIDMEVFANVNDSQLEPL 1606
Fly 1607 NSFATEQLIRRIALRQQEIKDSITFSPIDTSSVRSFYDASASFKTLSLPNGVKEFYCTVDNVLSD 1671
Fly 1672 TELQIAPCLSEFTKHEISLIQETSTLIKDAEPLMEPKVGDLCLARYSRDKQWYRA---NIKEISP 1733
Fly 1734 ILSPTSEQVTVFYIDFHDTEKVSFNHLKVMPSQLFMFPLRSFCVKLHGIKRNKSFKEKS-----V 1793
Fly 1794 RQALQA------CLCQHPLVFARVHYPLNYYPNRPNCDADLIEVELYENRHEKKLVYQSLCE 1849 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
qin | NP_650735.3 | zf-RING_5 | 25..75 | CDD:291308 | 15/66 (23%) |
BBOX | 139..174 | CDD:197662 | 5/34 (15%) | ||
TUDOR | 536..648 | CDD:278965 | 30/162 (19%) | ||
TUDOR | 741..859 | CDD:278965 | 32/137 (23%) | ||
TUDOR | <805..839 | CDD:119391 | 11/40 (28%) | ||
TUDOR | 981..1107 | CDD:278965 | 27/126 (21%) | ||
TUDOR | 1296..1403 | CDD:278965 | 27/134 (20%) | ||
TUDOR | 1337..1385 | CDD:119391 | 13/47 (28%) | ||
TUDOR | 1710..1761 | CDD:119391 | 16/53 (30%) | ||
Rnf17 | XP_038949233.1 | PHD_SF | 30..72 | CDD:419867 | 14/53 (26%) |
BBC | 137..>242 | CDD:128778 | 28/177 (16%) | ||
Tudor_TDRD4_rpt1 | 490..566 | CDD:410485 | 7/75 (9%) | ||
Tudor_TDRD4_rpt2 | 728..823 | CDD:410486 | 24/100 (24%) | ||
Tudor_TDRD4_rpt3 | 968..1049 | CDD:410487 | 19/95 (20%) | ||
Tudor_TDRD4_rpt4 | 1247..1314 | CDD:410488 | 19/69 (28%) | ||
Tudor_TDRD4_rpt5 | 1504..1608 | CDD:410489 | 36/208 (17%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 50 | 1.000 | Domainoid score | I11425 |
eggNOG | 1 | 0.900 | - | - | E1_COG1525 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 142 | 1.000 | Inparanoid score | I4387 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D117171at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_110200 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X7549 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
7 | 6.770 |