DRSC/TRiP Functional Genomics Resources

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Protein Alignment qin and Rnf17

DIOPT Version :9

Sequence 1:NP_650735.3 Gene:qin / 42236 FlyBaseID:FBgn0263974 Length:1857 Species:Drosophila melanogaster
Sequence 2:NP_001028215.1 Gene:Rnf17 / 30054 MGIID:1353419 Length:1640 Species:Mus musculus


Alignment Length:1994 Identity:402/1994 - (20%)
Similarity:678/1994 - (34%) Gaps:672/1994 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 SNLQNLLRCPKCSKCFTYLYNTNSEEDNHRPFLLGCGHTLCESCLWNDRLDP------KCAVC-- 74
            |..|....| :|::|...:  :.:..|:|:   ..|||..||.||    |.|      ||..|  
Mouse    20 SGAQGASGC-QCTRCGRKV--SVASGDHHK---FPCGHAFCELCL----LAPQEYTTSKCTDCEV 74

  Fly    75 ---------HSPA-------------PPTIVAKRSDCKSVANLRDLYELNYHVLGRTSSLSYLLP 117
                     |.|.             ||.:|   ::|.|  :|....:...:.|..:||:.    
Mouse    75 HTTVSMNQGHYPVDGFIEEDSSLEALPPKMV---NNCSS--DLEKTVDQLINDLEHSSSIH---- 130

  Fly   118 FAKDSANQSLSPSSISEIVQTVKCSECGNATASGECRQCNAFYCRRCFDAVHKRSRVLKSHIFRN 182
              ::.:|.|...|...||.:.:|.:.|.....|      ||.   :..|:...::| .::|....
Mouse   131 --RNVSNPSAVMSETEEIDEALKIAGCNFEQLS------NAI---KMLDSTQDQTR-QETHSLTE 183

  Fly   183 STEQDSSFSKKLRVGDQYFTL------PSQNLCIHHRMPKDKYCMKCYRSHCQICSTVHHSGHRI 241
            :.|:            |:.||      ..::||                                
Mouse   184 AVEK------------QFDTLLASLDSRKKSLC-------------------------------- 204

  Fly   242 RKLIEINQSYASEIPTTLNSLNMAHIHVLNGKQVVQRAKQKLNDYATETLASISKRFSHLHGLLQ 306
            .:||.....|.|::.|.              |..::..|..|     :....|:|.......|..
Mouse   205 EELIRRTDDYLSKLVTV--------------KSYIEEKKSDL-----DAAMKIAKELRSAPSLRT 250

  Fly   307 VAEL-QVIEKLR---ESSL----------PPQLKLN--EAMGQLSGYETV-IERLTKSLNSGVGN 354
            ..:| |:|..|:   ||.|          .|:|.:|  ||:...|....: .|..||.......:
Mouse   251 YCDLTQIIRTLKLTFESELSQVSSIIPRNTPRLDINCSEAICMFSSMGKIEFEDSTKCYPQENED 315

  Fly   355 DMAVPRDVSLRWLLKLICE-----HLEKIPTTVQVSKVDENPYR--------------------- 393
            ...|.:..:.|  .:|.|:     ..:|:...|...:..|.|.:                     
Mouse   316 GQNVQKKFNNR--KELCCDVYSSLEKKKVDAAVLTDETPEPPLQAEAPDRHLEGKKKQPTKEMVV 378

  Fly   394 VTCSRFMDI-------SNIFKCEFVNPNIQVCFKTD-LEIS-------RSLSSSPKG------EI 437
            ||..:.:.:       .::...|.:..|::.||..| :|.|       :...|:|.|      |:
Mouse   379 VTSPKTIAVLPQLGSSPDVIIEEIIEENLESCFTDDPIETSGYPKKPPQKEQSAPVGSKAGCPEL 443

  Fly   438 TFLTSSSSSKENFDPHSRKLLLAQNSKLKKATQVSQSQKKRGKNATEVAQSSLNSTAAIIDEFPA 502
            .|::...        |.....:.:.|::|.||.:.:..|       :|...||:.          
Mouse   444 VFVSHVI--------HPCHFYVRKYSQIKDATILEKKMK-------QVCNRSLHL---------- 483

  Fly   503 KDLDFLHNFSSLDITKRNKTTEDSSDWFKTDTLVRVRSVQSPEDFYVQGIHAAQRLREELDTFAH 567
                                  |.||..:....:.|.|:::  ..:.:||     :.|       
Mouse   484 ----------------------DPSDILELGARIFVNSIKN--RMWCRGI-----ITE------- 512

  Fly   568 TLSDSSSVPPTIVVGQNYIIHHKDKD-RYYRALVSQKLTNENLYNVFLTDIG------------V 619
                              ||..|.|: |...:.....:...:|..:|:.|.|            .
Mouse   513 ------------------IIPSKTKNIRKPCSPTKFSVCEISLIQIFMVDFGNSEVLIITGVGDT 559

  Fly   620 H--------LHVRCSDFRVV--------PERISHLPYSAVHCSLSELMPKNGESEWDSKASA-FL 667
            |        .|:..|||.::        .|.:..:|:.|..|||.:::|.|....|:.:|.. ||
Mouse   560 HEGPEHDGEQHITLSDFCLLLMKSEPYSEELLKDIPHLAHLCSLKDIVPYNSTEGWEKEAKVEFL 624

  Fly   668 KQIVQNNPVRVIVKKALTYELHG-------VDL-------ITSNYDTNISVRDSFLYCGLAISRD 718
            |         ::.|||:..::.|       |||       |:|  |..:|:||:.::..||..|.
Mouse   625 K---------MVNKKAVLMKVFGEEDDVLIVDLQKPPTNKISS--DMPVSLRDALVFMELARFRS 678

  Fly   719 GAPLWLPPAPTAL--RLPRISFRFGDVYMVQMLHVEDPQEFYVMRHDYEKKRLWLQFSLQEAMDR 781
            .:|.......|.|  ..|.:.....:| .|.:.|:..|.:||:              .|.|.:|.
Mouse   679 QSPRSHSEKNTTLCYHPPILPEEMTEV-SVMVCHINSPTDFYL--------------QLMENLDF 728

  Fly   782 IN-ISQLQNIFLGQ----LHLGCVLQS--------GGQWKRASIEQILPDGYVLVHLVDEGPSQK 833
            :: :..::..:.|:    |.:.|.||:        .|.|.||.:..:.....|.|..||.|.:.|
Mouse   729 LSLLKTIEEFYKGEDGENLEILCPLQNQACVAKFEDGIWYRAKVIGLPGHREVEVKYVDFGNTAK 793

  Fly   834 V-------FWDQLFVLPQKFWDTGLAIKCCLADVETRAEHSYTWTPEGTTLFKQLTSNPRLYMDV 891
            :       ..|:....|:|      ||||.||.||...:..  |:.:....|::.|.:..:...|
Mouse   794 ITLKDMRKIKDEFLEPPEK------AIKCKLAYVEPSKKSQ--WSKKAKEKFEEKTQDKFVTCSV 850

  Fly   892 ISCTE-DLVYVSLHFERS-NSETTSVGVQLVAHGHCTSSGESSRMITPTVSNRSVRFDEETKKFI 954
            |...| :::.|.|...|: .....|:..|||..|  .:|.|:...:..........:|...::.|
Mouse   851 IKILENNVLLVELFDSRAPGKSAVSINDQLVKEG--LASYEAGYTLKDNSKKHLEVWDPSPEEII 913

  Fly   955 AQQKVRPVELSPYRMPDNTER---NKRTTVNILYVRKPDEFYVTLPHFQKAINNLQKSVQKAAAA 1016
            ..:......||...:|:...:   ||...|||..|..|::.||.....:..:|:|:   :|..||
Mouse   914 TSEINNLSPLSVKSLPNENFQSLYNKELPVNICNVISPEKIYVQWLLTENLLNSLE---EKMVAA 975

  Fly  1017 MYQNMLPRTDWQVGDMCYARVQANCDSQALWYRGVVTGVIPPGITCPIVRYQVHLRDLG-ELIDD 1080
            ...:......|:....|..:|.|    :..|.||.:..::...:.      :|.|.|:| ||:.:
Mouse   976 YEHSEWKPVKWECDMHCAVKVPA----KNQWRRGQILRMVTDKLV------EVLLYDVGVELVVN 1030

  Fly  1081 VHSSSLANIDEADMRISSSAKRCHLHGIRPIG--DEWSKDAIDFFMDQLKAYNEIHVTGRGRTEN 1143
            :|  .|..:.|....:...:..|.|..|||.|  |:|:..|.|..        .:|:||...|  
Mouse  1031 IH--CLRELQENLKTMGRLSLECSLVDIRPTGGSDKWTATACDCL--------SLHLTGAIAT-- 1083

  Fly  1144 SLSVILWGSLSILTGPFSPATI-------KYVNINKALLMAGMAEKDHNSDSEDDQQSMPENVSV 1201
               :||..|.:  |.|. |..|       :.|:::|.|:..|:|.::.......:..|..:::.:
Mouse  1084 ---IILQESNT--TWPL-PVKIFCRDEKGERVDVSKYLIKKGLALRERRVSKSSNSHSPEKSLEI 1142

  Fly  1202 NSEEAAKANDWESCLSK-----IDGTSKTNDSLNLIESRSVTVGFEHNEDMPPLALLEDLGNTKN 1261
            ..|:.      :|.::|     .|...|..|.:|           ||.        :.|....|:
Mouse  1143 PLEQG------DSVVTKCFKINFDTNKKIADKVN-----------EHK--------VPDSKGKKS 1182

  Fly  1262 ---TTGETTPPAGWTTRRKCDKSVFTAIATNVTYECCIYLTLASDKPFIEHMGNLLVREYKPLMD 1323
               :||...|||...|      |.|.||.|      ||     .|...|..:..|...|...:||
Mouse  1183 ESRSTGCYRPPAVPNT------SSFEAIVT------CI-----GDDGTIFVVPKLSEFELIKMMD 1230

  Fly  1324 KQKER------STSYTYKVGQAVVVTYHMDNMIYRGIVQRLENNHNEYTVYYVDYGNMELVKADE 1382
            :.:..      ...|::|.|:...|. ..|.:.|||.|  :|.......|.|:|:|..|.:....
Mouse  1231 EIQSNLKCLGLLEPYSWKKGEPCAVR-GSDTLWYRGKV--MEVVGGTIRVQYLDHGFTEKIPQCH 1292

  Fly  1383 MLPYAPFPDLNAMCFLVELH------------GVRSKQGKYSLKEMDTVHLNLVMKLSGVRIVDD 1435
            :.|...:||....|...:|:            .:...|...|.:|:| :|   :|:|        
Mouse  1293 LYPILLYPDTPQFCIPCQLYQTLPVGNTWQPDAIELLQELLSKREVD-IH---IMEL-------- 1345

  Fly  1436 ETVGPNKIPKCQIKVGNVDIATMMIDSGMS----VPIEKQTIKNNTKYLPSQKFL--------ED 1488
                ||.      ..|.:.:  .:...|||    :...|..|..:|:.:..:|..        |:
Mouse  1346 ----PNN------SWGKLSV--HLYFDGMSLSHFMAHHKYCIFEHTEEIFKEKPRGQNKKYEDEN 1398

  Fly  1489 FKV-FDELDHLAAGEGELSDKEAP--PTQRKHDSISSVQQPPTKKFLVDQEEVEAFECDQDFDCQ 1550
            :|: |::|        .|.:.|||  |..     :||:..||.:.|.|..:.:  ...|:.:.| 
Mouse  1399 WKIRFEDL--------LLPEMEAPVLPPY-----LSSLLPPPEELFAVQVKHI--VSPDEMYIC- 1447

  Fly  1551 QAAQKMHLNNNFYLGDFGKYADETTARDEDEPHSNSSKSIDMEVFA---NVNDSQLEPLNSFATE 1612
                   |::......|..:.|     .:|...|..|:|.::|...   |.|.....||..|::|
Mouse  1448 -------LDSEDSYTQFNHHGD-----TDDSGVSWESESENLEEALQRFNKNVETFPPLTDFSSE 1500

  Fly  1613 QLIRRIALRQQEIKDSITFSPIDTSSVRSFYDASASFKTLSLPNGVKEFYCTVDNVLSDTELQIA 1677
            .                                                                
Mouse  1501 M---------------------------------------------------------------- 1501

  Fly  1678 PCLSEFTKHEISLIQETSTLIKDAEPLMEPKVGDLCLARYSRDKQWYRA---NIKEISPILSPTS 1739
            |||:|:.                                   |..||||   :|||.:|:     
Mouse  1502 PCLAEYA-----------------------------------DGLWYRAKIISIKEFNPL----- 1526

  Fly  1740 EQVTVFYIDFHDTEKVSFNHLKVMPSQLFMFPLRSFCVKLHGIK 1783
             .|.|.::|:..|||::.|.|:.:|.||..:|.::..|.|.|.|
Mouse  1527 -SVLVLFVDYGCTEKLTINRLRQIPVQLMQYPAQAIKVLLAGFK 1569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qinNP_650735.3 zf-RING_5 25..75 CDD:291308 17/66 (26%)
BBOX 139..174 CDD:197662 6/34 (18%)
TUDOR 536..648 CDD:278965 24/140 (17%)
TUDOR 741..859 CDD:278965 32/137 (23%)
TUDOR <805..839 CDD:119391 11/40 (28%)
TUDOR 981..1107 CDD:278965 30/126 (24%)
TUDOR 1296..1403 CDD:278965 27/124 (22%)
TUDOR 1337..1385 CDD:119391 13/47 (28%)
TUDOR 1710..1761 CDD:119391 16/53 (30%)
Rnf17NP_001028215.1 iSH2_PI3K_IA_R 158..>242 CDD:304922 22/156 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 348..376 2/27 (7%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 413..435 5/21 (24%)
TUDOR 444..>551 CDD:278965 27/185 (15%)
TUDOR 698..819 CDD:278965 31/141 (22%)
TUDOR 755..801 CDD:119391 10/45 (22%)
TUDOR 937..1053 CDD:278965 31/130 (24%)
TUDOR 990..1036 CDD:119391 14/57 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1170..1191 7/39 (18%)
TUDOR 1196..1312 CDD:278965 33/135 (24%)
TUDOR 1250..1295 CDD:119391 13/47 (28%)
TUDOR 1426..1567 CDD:278965 47/260 (18%)
TUDOR 1501..1548 CDD:119391 21/151 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 48 1.000 Domainoid score I11861
eggNOG 1 0.900 - - E1_COG1525
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 148 1.000 Inparanoid score I4388
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D117171at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm43916
orthoMCL 1 0.900 - - OOG6_110200
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X7549
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.770

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