DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tssk and CIPK26

DIOPT Version :10

Sequence 1:NP_650732.1 Gene:Tssk / 42233 FlyBaseID:FBgn0038630 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_850861.2 Gene:CIPK26 / 832246 AraportID:AT5G21326 Length:439 Species:Arabidopsis thaliana


Alignment Length:160 Identity:30/160 - (18%)
Similarity:65/160 - (40%) Gaps:35/160 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRRLLRCFFILIAVVNLGIFLVGLGVGIIQNDLLMVSGVLTILGF-LGMVLSAVA---------- 54
            :||:::...:.::.|.|.:.|:.||.   ...||..:....::|. .|:.||||:          
plant     4 LRRIVKLRMLRMSCVVLVLLLLFLGA---LTALLPATNEDAVVGVRRGIPLSAVSPKDVFTLIMQ 65

  Fly    55 WFVQSSKAKKLMKQREQMPE--------EMITRDTTEAVMKNIRGIPFLIQAIQYSMETTYYRDM 111
            .:.::....|::...:.||.        ..:.:||.:.:.::....|         :..|:.:..
plant    66 TYNRTDLLLKMLNHYQAMPGLSHVIVVWNNVGQDTPQELWESFGPHP---------VPVTFKKQK 121

  Fly   112 MNELNDGIVRTSVIHTAPACQSVLDSEGDT 141
            :|.:.:.:.....|.|    |:||..:.||
plant   122 VNLMRNRLQSFPEIQT----QAVLMMDDDT 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TsskNP_650732.1 STKc_TSSK-like 27..291 CDD:270982 23/134 (17%)
CIPK26NP_850861.2 STKc_SnRK3 12..267 CDD:271133 28/152 (18%)
CIPK_C 312..426 CDD:213380
Blue background indicates that the domain is not in the aligned region.

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