DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tssk and AT5G21222

DIOPT Version :10

Sequence 1:NP_650732.1 Gene:Tssk / 42233 FlyBaseID:FBgn0038630 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_850859.2 Gene:AT5G21222 / 832244 AraportID:AT5G21222 Length:831 Species:Arabidopsis thaliana


Alignment Length:230 Identity:48/230 - (20%)
Similarity:73/230 - (31%) Gaps:63/230 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 WFVQSSKAKKLMK------QREQMPEEMITRDTTEAVMKNIRGIPFLIQA-IQYSMETTYYRDMM 112
            ||.......|:||      .|...||..|.          :| ||.|:.| .|.|:......:.|
plant   230 WFRTRGGKWKVMKVETSAVGRGAHPEPKIV----------VR-IPVLMPAERQVSLWFQVIENKM 283

  Fly   113 NELNDGIVRTSVIHTAPACQSVLDSEGDTEST--------------------RPTPTPRRSRNSA 157
            |....|..|..|..:..:.|.  .:||.|...                    |..|.|.|.:..:
plant   284 NWQETGSGRRLVAKSESSDQD--KAEGKTSEAGCSEREERAWGRAADGAFLMREAPPPARKQGKS 346

  Fly   158 EEQWLAHGEKWQNEQLRLSMERENPHFLVFPYSEAS-----------PHRESMNNMDALVHEFSR 211
            ..|..:.||:..:::......|.:|....:.:..:|           |.|.::::       ||.
plant   347 AGQCFSGGEQLDHQEEVEGGRRRSPASSSWNWRRSSLPESTFASGEVPDRPTLSS-------FSE 404

  Fly   212 IDSIK---RPHCFTKQQKIAHNRFQVRCIGMSAEF 243
            :.|.:   .|.  ..|.|....|.||...|....|
plant   405 VPSSRSGSEPR--GGQWKRPSQRPQVHVSGFQLPF 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TsskNP_650732.1 STKc_TSSK-like 27..291 CDD:270982 48/230 (21%)
AT5G21222NP_850859.2 Protein Kinases, catalytic domain 12..267 CDD:473864 13/47 (28%)
PPR_2 318..364 CDD:463778 7/45 (16%)
PPR repeat 321..348 CDD:276811 4/26 (15%)
PLN03218 <342..>740 CDD:215636 19/105 (18%)
PPR repeat 356..383 CDD:276811 2/26 (8%)
PPR repeat 389..418 CDD:276811 6/37 (16%)
PPR repeat 424..453 CDD:276811 5/14 (36%)
PPR repeat 460..489 CDD:276811
PPR repeat 502..525 CDD:276811
PPR_2 529..576 CDD:463778
PPR repeat 533..560 CDD:276811
PPR repeat 566..595 CDD:276811
PPR repeat 601..629 CDD:276811
PPR repeat 636..665 CDD:276811
PPR repeat 671..697 CDD:276811
PPR repeat 707..736 CDD:276811
Blue background indicates that the domain is not in the aligned region.

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