DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tssk and AMPKalpha

DIOPT Version :10

Sequence 1:NP_650732.1 Gene:Tssk / 42233 FlyBaseID:FBgn0038630 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_477313.1 Gene:AMPKalpha / 43904 FlyBaseID:FBgn0023169 Length:582 Species:Drosophila melanogaster


Alignment Length:294 Identity:90/294 - (30%)
Similarity:148/294 - (50%) Gaps:26/294 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SAGIRQLGTRSSDVDALAQRG-YNVGHKIGEGSYATV------ITAGYADDHGHGVHLACKIIDK 64
            :|....:...|::...|.:.| |.:|..:|.|::..|      ||.         |.:|.||:::
  Fly     6 AAAAEAVAAGSANGQPLVKIGHYLLGATLGTGTFGKVKIGEHQITR---------VKVAVKILNR 61

  Fly    65 AKAPT-DFVNKFFPRELEILTKIDHSNIIQIHSILQRGPKIFIFMRYAENGDLLSHIKRSGPIDE 128
            .|..: |.|.| ..||::.|....|.:||:::.::.....||:.|.|...|:|..:|.:.|.:.|
  Fly    62 QKIKSLDVVGK-IRREIQNLKLFRHPHIIKLYQVISTPSDIFMIMEYVSGGELFDYIVKHGKLQE 125

  Fly   129 KQSKIWFFQMSKALKYLHNLDIAHRDLKCENILLSKRLNIKLADFGFARYCRDDNGREMKSETYC 193
            .|::.:|.|:...:.|.|...|.|||||.||:||...:::|:||||.:....|  |..::  |.|
  Fly   126 HQARRFFQQIISGVDYCHRHMIVHRDLKPENLLLDHNMHVKIADFGLSNMMLD--GEFLR--TSC 186

  Fly   194 GSAAYAAPEVVCGRPYDPKLADAWSLGVILFIMMNAKMPFDDSNLTKLLEDQRNRKFAFRRKLQE 258
            ||..||||||:.|:.|.....|.||.||||:.::...:||||.::..|....::..|    .:.|
  Fly   187 GSPNYAAPEVISGKLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFRKIKSGIF----PIPE 247

  Fly   259 TISAQAKATVSVLLEPEAHARWNLREILNCAWLR 292
            .::.|....|..:|:.:...|.|:.||....|.:
  Fly   248 YLNKQVVNLVCQMLQVDPLKRANIEEIKKHEWFQ 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TsskNP_650732.1 STKc_TSSK-like 27..291 CDD:270982 86/271 (32%)
AMPKalphaNP_477313.1 STKc_AMPK_alpha 25..280 CDD:270981 86/272 (32%)
UBA_AID_AMPKalpha 297..360 CDD:270521
AMPKA_C 457..580 CDD:213378
Blue background indicates that the domain is not in the aligned region.

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