DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7694 and AT1G14200

DIOPT Version :9

Sequence 1:NP_001138076.1 Gene:CG7694 / 42230 FlyBaseID:FBgn0038627 Length:147 Species:Drosophila melanogaster
Sequence 2:NP_172872.1 Gene:AT1G14200 / 837980 AraportID:AT1G14200 Length:179 Species:Arabidopsis thaliana


Alignment Length:123 Identity:32/123 - (26%)
Similarity:56/123 - (45%) Gaps:31/123 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSDYFEELGHEPTGPLGANDLARNLKRLQVLAIMNGIDMEIEVPEASKRAILELPVHEIVKSDEG 65
            :.|:|.:.|.:...|...::: .|:.|:.:     |.|                      |...|
plant    70 LDDFFSDGGKQGRSPALKSEV-ENMPRVVI-----GED----------------------KEKYG 106

  Fly    66 GDLECSVCKEPAEEGQKYRILPCKHEFHEECILLWLKKTNSCPLCRYELETDDPVYEE 123
            |  .|::|.:...:|.....:||||:||.:|:..||.:..:||:||||:..:: |.||
plant   107 G--SCAICLDEWSKGDVAAEMPCKHKFHSKCVEEWLGRHATCPMCRYEMPVEE-VEEE 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7694NP_001138076.1 zf-RING_2 69..111 CDD:290367 14/41 (34%)
AT1G14200NP_172872.1 RING-H2_PA-TM-RING 109..150 CDD:319368 14/40 (35%)
RING-H2 finger (C3H2C3-type) 109..149 CDD:319368 14/39 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1249953at2759
OrthoFinder 1 1.000 - - FOG0000184
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR15710
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.020

Return to query results.
Submit another query.