DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7694 and RHC1A

DIOPT Version :9

Sequence 1:NP_001138076.1 Gene:CG7694 / 42230 FlyBaseID:FBgn0038627 Length:147 Species:Drosophila melanogaster
Sequence 2:NP_001324188.1 Gene:RHC1A / 818680 AraportID:AT2G40830 Length:328 Species:Arabidopsis thaliana


Alignment Length:107 Identity:37/107 - (34%)
Similarity:52/107 - (48%) Gaps:11/107 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 PEASKRAILELPVHEIVKSD-EGGDLECSVCKEPAEEGQKYRILPCKHEFHEECILLWLKKTNSC 107
            |.|.:.||..||..:|.:.. ...|..|.|||:..|.|.:.:.:||.|.:|.:||:.||.:.|||
plant   163 PPAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSC 227

  Fly   108 PLCRYEL-ETDDPVYEE-----LRRFR----QDEANRREREN 139
            |:||.|| ....|...:     .|.:|    ...:|.||..|
plant   228 PVCRQELPSASGPSSSQNRTTPTRNYRSSSSSSSSNSRENGN 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7694NP_001138076.1 zf-RING_2 69..111 CDD:290367 18/41 (44%)
RHC1ANP_001324188.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1249953at2759
OrthoFinder 1 1.000 - - FOG0000184
OrthoInspector 1 1.000 - - otm2840
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR15710
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.020

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