DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7694 and RNF130

DIOPT Version :9

Sequence 1:NP_001138076.1 Gene:CG7694 / 42230 FlyBaseID:FBgn0038627 Length:147 Species:Drosophila melanogaster
Sequence 2:XP_024301897.1 Gene:RNF130 / 55819 HGNCID:18280 Length:448 Species:Homo sapiens


Alignment Length:127 Identity:38/127 - (29%)
Similarity:59/127 - (46%) Gaps:29/127 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 RNLKRLQVLAIMNGIDMEIEVPEASKRAILELPVHEIVKSDEGGDLE---CSVCKEPAEEGQKYR 84
            ||.:||               .:|:|:||.:|....:.|.|:..|.:   |:||.|..::....|
Human   229 RNQRRL---------------GDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVR 278

  Fly    85 ILPCKHEFHEECILLWLKKTNSCPLCRYELE-----------TDDPVYEELRRFRQDEANRR 135
            ||||||.||:.|:..||.:..:||:|:..:.           ||:..::..|..|....|||
Human   279 ILPCKHVFHKSCVDPWLSEHCTCPMCKLNILKALGIVPNLPCTDNVAFDMERLTRTQAVNRR 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7694NP_001138076.1 zf-RING_2 69..111 CDD:290367 18/44 (41%)
RNF130XP_024301897.1 PA_GRAIL_like 40..179 CDD:239037
zf-rbx1 <197..>306 CDD:331150 31/91 (34%)
RING_Ubox 262..310 CDD:327409 19/47 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.