DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7694 and Rnf6

DIOPT Version :9

Sequence 1:NP_001138076.1 Gene:CG7694 / 42230 FlyBaseID:FBgn0038627 Length:147 Species:Drosophila melanogaster
Sequence 2:XP_038945264.1 Gene:Rnf6 / 304271 RGDID:1306092 Length:679 Species:Rattus norvegicus


Alignment Length:139 Identity:41/139 - (29%)
Similarity:47/139 - (33%) Gaps:45/139 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 EPTGPLGANDLARNLKRLQVLAIMNGIDMEIEVPEASKRAILEL------------PVHEIVK-- 61
            ||..|.......|.|:|..            .|.||....||.|            |:..:.|  
  Rat   552 EPAPPQARTRSRRQLRRAD------------NVVEAGTLPILRLAHFFLLNEGDDDPIRGLTKEQ 604

  Fly    62 ---------SDEGGDLE----CSVCKEPAEEGQKYRILPCKHEFHEECILLWLKKTNSCPLCRYE 113
                     .....|.|    ||||......|.|.|.|||.||||..||..||.:..:||:||  
  Rat   605 IDNLSTRSYEQSAVDSELGKVCSVCISDYVAGNKLRQLPCLHEFHIHCIDRWLSENCTCPVCR-- 667

  Fly   114 LETDDPVYE 122
                .||.|
  Rat   668 ----RPVLE 672

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7694NP_001138076.1 zf-RING_2 69..111 CDD:290367 21/45 (47%)
Rnf6XP_038945264.1 RING_Ubox 624..668 CDD:418438 22/49 (45%)
RING-H2 finger (C3H2C3-type) 626..666 CDD:319361 20/39 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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