DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fru and Hic2

DIOPT Version :9

Sequence 1:NP_001163648.1 Gene:fru / 42226 FlyBaseID:FBgn0004652 Length:960 Species:Drosophila melanogaster
Sequence 2:NP_849253.2 Gene:Hic2 / 58180 MGIID:1929869 Length:619 Species:Mus musculus


Alignment Length:573 Identity:129/573 - (22%)
Similarity:196/573 - (34%) Gaps:144/573 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 GAMDQQFCLRWNNH---------PTNLTGVLTSLLQREA---LCDVTLACEGETVKAHQTILSAC 157
            |.:..::| .|..|         |::...:|..|.|:.|   ||||.:..|....:||:.:|:|.
Mouse     4 GPLALRWC-PWAGHRDMGPDMELPSHSKQLLLQLNQQRAKGFLCDVIIMVENSIFRAHKNVLAAS 67

  Fly   158 SPYFETIFLQNQHPHPIIYLKD-VRYSEMRSLLDFMYKGE-VNVGQSSLPMF---LKTAESLQVR 217
            |.||:::.|   |.:.|....| |..:..:.:|||:|.|: :...|.|.|.|   |..|..||:.
Mouse    68 SIYFKSLVL---HDNLINLDTDMVSSTVFQQILDFIYTGKLLPSDQPSEPNFSTLLTAASYLQLP 129

  Fly   218 GLTDNNNLNYRSDC-DKLRDSAASSPTGRGPSNYTGGLGGAGGVADAMRESRDSLRSRCER---- 277
            .|.        :.| .||:  .|..|.|.|..       |..|:....|..|.|..|..:.    
Mouse   130 ELA--------ALCRRKLK--RAGKPFGPGRV-------GTAGIGRPTRSQRLSTASVIQARFPG 177

  Fly   278 --DLR------DELTQRSSSSMSERSSAAAAAAAAAAAVAAAGGNVNAAAVALGLTTPTGGERSP 334
              |:|      .||.|...|...                ...|.:...:...|||..|.|||.  
Mouse   178 LVDVRKGHPAPQELPQAKGSDDE----------------LFLGTSTQESTHGLGLGGPAGGEM-- 224

  Fly   335 SVGSASAAAAAAAVAAAVAAAANRSASADGCS-----DRGSERGTLERTD-----SRDDLLQLDY 389
            .:|..|.:.               :.|:.||.     |...:...|..|.     :.:|..||..
Mouse   225 GLGGCSTST---------------NGSSGGCEQELGLDLSKKSPPLPPTTPGPHLTPEDPAQLSD 274

  Fly   390 SNKDNNNSNSSSTGGNNNNNNNNNNNSSSNNNNSSSNRERNN------SGERERERERERERDRD 448
            |.:::....|:|.....|:.:.....::..........|.|:      .|.:.|:..|...|.:|
Mouse   275 SQRESPAPTSTSALPVGNSASFVELGATPEEPMDVEGAEENHLSLLEGQGGQPRKSLRHSARKKD 339

  Fly   449 ----RELSTTPVEQLSSSKRRRKNSSSNCDNSLSSSHQDRHYPQDSQANFKSSPVPKTG-GSTS- 507
                ..::.:|.:      ||...|..:|.........|| .|....|:......|... |..| 
Mouse   340 WNKKEPVAGSPFD------RRETGSKGSCPGEEGEGTGDR-VPNGVLASSAGGGGPSASYGEQSF 397

  Fly   508 ---ESEDAG--GRHDSPLSMTTSVHLGGGGGNVGA-----------ASALSGLSQSLSIKQELMD 556
               |.|:.|  |..||..|.:.     ||.|:.||           .|....:...:...:....
Mouse   398 PCKEEEENGKDGSEDSGQSGSE-----GGSGHTGAHYVYRQEGYETVSYGDNVYVCIPCAKGFPS 457

  Fly   557 AQQQQQHREHH------VALPPDY-LPSAALKLHAEDMSTLLTQHALQAADAR 602
            ::|...|.|.|      :.....| ..|...:..|||:|   |..|...||:|
Mouse   458 SEQLNAHVETHTEEELFIKEEGAYETGSGGAEEEAEDLS---TPSAAYTADSR 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fruNP_001163648.1 BTB 126..221 CDD:279045 35/102 (34%)
BTB 137..221 CDD:197585 29/88 (33%)
C2H2 Zn finger 901..918 CDD:275368
C2H2 Zn finger 925..944 CDD:275368
Hic2NP_849253.2 BTB 40..140 CDD:279045 34/110 (31%)
BTB 47..141 CDD:197585 32/106 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 180..293 28/145 (19%)
Binding to CtBP. /evidence=ECO:0000250 247..249 1/1 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 307..426 29/130 (22%)
C2H2 Zn finger 448..468 CDD:275368 3/19 (16%)
zf-C2H2 509..531 CDD:278523
C2H2 Zn finger 511..531 CDD:275368
zf-C2H2 537..559 CDD:278523
C2H2 Zn finger 539..559 CDD:275368
zf-H2C2_2 552..576 CDD:290200
COG5048 563..>617 CDD:227381
C2H2 Zn finger 567..587 CDD:275368
zf-H2C2_2 580..604 CDD:290200
C2H2 Zn finger 595..615 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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