DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fru and lov

DIOPT Version :9

Sequence 1:NP_001163648.1 Gene:fru / 42226 FlyBaseID:FBgn0004652 Length:960 Species:Drosophila melanogaster
Sequence 2:NP_611994.3 Gene:lov / 38007 FlyBaseID:FBgn0266129 Length:1143 Species:Drosophila melanogaster


Alignment Length:884 Identity:185/884 - (20%)
Similarity:285/884 - (32%) Gaps:348/884 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 LDLQTPHKRNIE--------TDVRAP----PPPLPPPPLPLP------------PASPSLQISRY 100
            |.|:.|...:::        |...||    ||..||.|.|||            .|:|...:...
  Fly    34 LPLELPLPLSVQLQLLAKTPTSDHAPMHSTPPTTPPTPPPLPLNMSQSASAVTEAATPENSLPAT 98

  Fly   101 NTDQGAM------DQQFCLRWNNHPTNLTGVLTSLLQREALCDVTLACEGETVKAHQTILSACSP 159
            ...:||:      ...:.||||||..::.....:||:.:.|.||||.|...:::||:.:||||||
  Fly    99 PPSEGALAVPSAPQDHYSLRWNNHQNHILRAFDALLKTKTLVDVTLVCAETSIRAHKMVLSACSP 163

  Fly   160 YFETIFLQNQHPHPIIYLKDVRYSEMRSLLDFMYKGEVNVGQSSLPMFLKTAESLQVRGLTDNNN 224
            :|:.:|.:....||:|.|||.|...:::::||||:||::|.|..|...::..||||||||.:::.
  Fly   164 FFQRVFAETPCKHPVIVLKDFRGWVVQAIVDFMYRGEISVPQQRLQTLIQAGESLQVRGLVESSV 228

  Fly   225 LNYRSDCDKLRDSAASSPT-GRGPSNYTGGLGGAGGVADAMRESRDSLRSRCERDLRDELTQRSS 288
            ..:             :|| ...|.::        |:.|                     |...|
  Fly   229 PEH-------------TPTPAASPDDF--------GMLD---------------------TSMLS 251

  Fly   289 SSMSERSSAAAAAAAAAAAV---AAAGGNVNAAAVALGLTTPTGGERSPSVGSASAAAAAAAVAA 350
            |:..:........:.....:   |...||.::|..||||                          
  Fly   252 STFEDECPTMVRPSKGGKLLMPSARLFGNASSAIAALGL-------------------------- 290

  Fly   351 AVAAAANRSASADGCSDRGSERGTLERTDSRDDLLQLDYSNKDNNNSNSSSTGGNNNNNNNNNNN 415
                                                                             
  Fly   291 ----------------------------------------------------------------- 290

  Fly   416 SSSNNNNSSSNRERNNSGERERERERERERDRDREL-STTPVEQLSSSKRRRKNSSSNCDNSLSS 479
                              .|:||:|.:|:.:.|:|| .::|:.:...::.||             
  Fly   291 ------------------RRKREQESDRDLESDQELGGSSPMPRRKQARPRR------------- 324

  Fly   480 SHQDRHYPQDSQANFKSSPVPKTGGSTSESEDAGGRHDSPLSMTTSVHLGGGGGNVGAASALSGL 544
                           :|..||               ||..|:.|.:..|                
  Fly   325 ---------------RSGDVP---------------HDFTLNKTDAESL---------------- 343

  Fly   545 SQSLSIKQELMDAQQQQQHREHHVALPPDYLPSAALKLHAEDMSTLLTQHALQAADARDEHNDAK 609
             |:: ||.||::..::.|..    |...|.....|.|:.:....||:        :...|....|
  Fly   344 -QTV-IKHELLERAERDQEE----APDQDNSQGEAEKISSSPAKTLV--------ERAKEQKSMK 394

  Fly   610 QLQLDQTDNIDGRVKCFNIKHDRHPDRELDRNHREHDDDPGVIEEVVVDHVREMEAGNEHDPEEM 674
            :...||..::          ::.|...|||   .|.|||.        ||..|    .|.|.||:
  Fly   395 EEGSDQPRSL----------NENHHQLELD---DEDDDDQ--------DHEEE----EEQDIEEL 434

  Fly   675 KEAAYHATPPKYRRAVVYAPPHPDEEAASGSGSDIYVDGGYN-CEYKCKELNMRAIRCSRQQHMM 738
                .|.|....|:|...|   .:..|.|.:.|....||..: |..|            :.:.::
  Fly   435 ----IHTTNELRRQAAAAA---ANAAAMSPNPSPCLSDGPEDLCTTK------------KGKELI 480

  Fly   739 SHYSPHHPHHRSLIDCPAEAAYSPPVA-NNQAYLASNGAVQQLDLS---------TYHGHANHQL 793
            |..|       |..||.:....|..:. |||..:.|...::||:.:         |.....|:.|
  Fly   481 SGPS-------SSADCESNNNNSSKLQDNNQRIMLSLKDIRQLNANPNPTAIHTPTSCSGGNNGL 538

  Fly   794 HQHPPSATHPSHSQSSP--HYPSASGAGAGAGSVSVSIAGSASGSATSAPASVATSAVSPQPSSS 856
            ...||....|.....||  |..:.......|.:.:|:.|||..                 .|...
  Fly   539 LTFPPPGLRPPGLPDSPPCHMEALEAQMHAAAAAAVAAAGSGE-----------------HPFHH 586

  Fly   857 STGSTSSAAAVAAAAAAAANR--------RDHNIDYSTL 887
            .......:.|.||||||...|        ||||...|.|
  Fly   587 MEHQMEMSLAAAAAAAAMHQREPRDPRDGRDHNAFASNL 625

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fruNP_001163648.1 BTB 126..221 CDD:279045 42/94 (45%)
BTB 137..221 CDD:197585 39/83 (47%)
C2H2 Zn finger 901..918 CDD:275368
C2H2 Zn finger 925..944 CDD:275368
lovNP_611994.3 BTB 130..225 CDD:279045 42/94 (45%)
BTB 141..226 CDD:197585 39/84 (46%)
HTH_psq 791..834 CDD:283007
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 63 1.000 Domainoid score I10232
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1229475at2759
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
55.020

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