DRSC/TRiP Functional Genomics Resources

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Protein Alignment fru and hic2

DIOPT Version :10

Sequence 1:NP_001163648.1 Gene:fru / 42226 FlyBaseID:FBgn0004652 Length:960 Species:Drosophila melanogaster
Sequence 2:NP_878289.2 Gene:hic2 / 359828 ZFINID:ZDB-GENE-030619-1 Length:560 Species:Danio rerio


Alignment Length:505 Identity:102/505 - (20%)
Similarity:187/505 - (37%) Gaps:97/505 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 PTNLTGVLTSLLQREA---LCDVTLACEGETVKAHQTILSACSPYFETIFLQNQHPHPIIYLKD- 179
            |.:...:|..|.|:.|   ||||.:..|....:||:.||:|.|.||:::.|   |.:.|....| 
Zfish     4 PNHAKQLLLQLNQQRAKGYLCDVIIVVENALFRAHKNILAASSIYFKSLIL---HDNLINLDTDM 65

  Fly   180 VRYSEMRSLLDFMYKGEV----NVGQSSLPMFLKTAESLQVRGLTDNNNLNYRSDCDKLRDSAAS 240
            |..|..|.:|||:|.|::    .....:....|..|..||:..|........:.:...|.:...:
Zfish    66 VNPSVFRQVLDFIYTGKLLSSDQFSDHNFNALLTAASYLQLHDLAALCRKKLKRNGRSLLNKPTT 130

  Fly   241 SPTGRGPSNYTGGLGGAGGVADAMRESRDSLRS-RCERDLRDELTQRSSSSMSERSSAAAAAAAA 304
            ...||...|..  |.......:.|...:||.:: |.|..::|:|   |...|..|::....:.:.
Zfish   131 PTNGRTSRNQR--LSSTPVTPNQMSGLKDSEKTKRHEELIKDDL---SEDEMFARNTHCTTSNSL 190

  Fly   305 AAAVAAAGGNVNAAAVALGLTTPTGGERSPSVGSASAAAAAAAVAAAVAAAANRSASADGCSDRG 369
            :.:.:..|.|.:.....|||..   .::|||..:|:...:.:::......:|:.|.:        
Zfish   191 SPSTSKNGSNGSCGMQELGLDL---SKKSPSGSTATEEVSPSSIPQESPQSASESTA-------- 244

  Fly   370 SERGTLERTDSRDDLLQLDYSNKDNNNSNSSSTGGNNNNNNNNNNNSSSNNNNSSSNRERNNSGE 434
                              :.::.|.|.:..:.|.|............|....:...::.......
Zfish   245 ------------------NSASFDENPNTQNLTAGEPMELGVGECEESQPPPDVDQHKSSRQVTR 291

  Fly   435 RERERERERERDRDRELSTTPVEQLSSSKR-----RRKNSSSNCDNSLSSSHQDRHYP-QDSQAN 493
            :.|:.:.|.::..|.|..|.|   ...|||     .|..:..|.::.:|...:|.... ::.|..
Zfish   292 QRRQPKSEGKKGEDMERVTLP---NGVSKRLKVAGERLPAGGNGNSEVSFQCKDEEEGLENGQEQ 353

  Fly   494 FKSSPVPKTGGSTSESEDAGGRH-----------DSPLSMTTSVHLGGGGGNVGA----ASALSG 543
            .:.|         .:||:.|||:           :..|.....|.:..|.|...:    |...:.
Zfish   354 SEES---------GQSENEGGRNSANYVYRQEGFEPALGDNLYVCIPCGKGFPSSEELNAHVETH 409

  Fly   544 LSQSLSIKQELMDAQQQQQHREHHVALPPDYLPSAALKLHAEDMSTLLTQ 593
            ..:.|.||:|..|:..::.                  ::.|||:|:.:||
Zfish   410 TEEELYIKEEDNDSYPKED------------------EVEAEDLSSQITQ 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fruNP_001163648.1 BTB_POZ_BAB-like 135..218 CDD:349624 29/87 (33%)
C2H2 Zn finger 901..918 CDD:275368
C2H2 Zn finger 925..944 CDD:275368
hic2NP_878289.2 BTB_POZ_ZBTB30_HIC2 3..122 CDD:349643 35/120 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 122..163 8/42 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 183..367 35/224 (16%)
C2H2 Zn finger 389..409 CDD:275368 3/19 (16%)
SUF4-like 452..>497 CDD:411020
C2H2 Zn finger 452..472 CDD:411020
C2H2 Zn finger 452..472 CDD:275368
zf-C2H2 478..500 CDD:395048
C2H2 Zn finger 480..500 CDD:275368
C2H2 Zn finger 480..497 CDD:411020
zf-C2H2 506..528 CDD:395048
C2H2 Zn finger 508..528 CDD:275368
zf-H2C2_2 520..545 CDD:463886
C2H2 Zn finger 536..556 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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