DRSC/TRiP Functional Genomics Resources

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Protein Alignment fru and CG12236

DIOPT Version :9

Sequence 1:NP_001163648.1 Gene:fru / 42226 FlyBaseID:FBgn0004652 Length:960 Species:Drosophila melanogaster
Sequence 2:NP_727050.1 Gene:CG12236 / 31523 FlyBaseID:FBgn0029822 Length:553 Species:Drosophila melanogaster


Alignment Length:896 Identity:158/896 - (17%)
Similarity:295/896 - (32%) Gaps:398/896 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 AMDQQFCLRWNNHPTNLTGVLTSLLQREALCDVTLACEGETVKAHQTILSACSPYFETIFLQNQH 170
            |..||:.|||||:..:||..|.:....:...||:|..:|..:|||:.:||:||.||:.||.:|.|
  Fly     2 ATTQQYSLRWNNYLRHLTYSLDNHRLNDDFVDVSLCVDGRRIKAHKVVLSSCSSYFKEIFKENPH 66

  Fly   171 PHPIIYLKDVRYSEMRSLLDFMYKGEVNVGQSSLPMFLKTAESLQVRGLTDNNNLNYRSDCDKLR 235
            |||:|..|.:::.::.|:::|||:|||||.|.:|..||:|||.|.|:|||               
  Fly    67 PHPVIIFKFIKFEDLNSIIEFMYQGEVNVQQEALQSFLQTAELLAVQGLT--------------- 116

  Fly   236 DSAASSPTGRGPSNYTGGLGGAGGVADAMRESR------DSLRSRCERDLRDELTQRSSSSMSER 294
              |......:.|            ||..:.|.:      .::|:..|:       |:..|::::.
  Fly   117 --AEEKEKPQIP------------VAPLISEHKLIKTIPSTIRAVNEQ-------QQQVSNVAQA 160

  Fly   295 SSAAAAAAAAAAAVAAAGGNVNAAAVALGLTTPTGGERSPSVGSASAAAAAAAVAAAVAAAANRS 359
            .:|.......||.:..|   .||:.|             ||...|:|||||||            
  Fly   161 QTATQTIEIPAATLLQA---TNASQV-------------PSQVVAAAAAAAAA------------ 197

  Fly   360 ASADGCSDRGSERGTLERTDSRDDLLQLDYSNKDNNNSNSSSTGGNNNNNNNNNNNSSSNNNNSS 424
                                   ..||:.:..:.:::..::..          .:....:.....
  Fly   198 -----------------------QQLQVQHQQQQHHHVQTTQI----------QHIQVQSAPPPQ 229

  Fly   425 SNRERNNSGERERERERERERDRDRELSTTPVE------------QLSSSKRRRKNSSSNCDNSL 477
            ..:::....::::::::::::.:.::..||||:            ..:||.::||.:.|:.|:::
  Fly   230 QQQQQQQQQQQQQQQQQQQQQQQSQQQQTTPVQTQHLTITNAVALPAASSVKKRKITFSDDDDNM 294

  Fly   478 SSSHQDRHYPQDSQANFKSSPVPKTGGSTSESEDAGGRHDSPLSMTTSVHLGGGGGNVGAASALS 542
            .::....:..:|.|...|::.:....|                                      
  Fly   295 YTTETVDYAVKDEQTIVKTAEMTFLRG-------------------------------------- 321

  Fly   543 GLSQSLSIKQELMDAQQQQQHREHHVALPPDYLPSAALKLHAEDMSTLLTQHALQAADARDEHND 607
                  ::|.::                 |||:                      ..:..|..:|
  Fly   322 ------AVKMDI-----------------PDYI----------------------VGEVDDRLSD 341

  Fly   608 AKQLQLDQTDNIDGRVKCFNIKHDRHPDRELDRNHREHDDDPGVIEEVVVDHVREMEAGNEHDPE 672
            .                                                                
  Fly   342 G---------------------------------------------------------------- 342

  Fly   673 EMKEAAYHATPPKYRRAVVYAPPHPDEEAASGSGSDIYVDGGYNCEYKCKELNMRAIRCSRQQHM 737
                                |.|...::|.:.:..::   ..|:.||:.                
  Fly   343 --------------------ATPQTSQDATTAAAQNV---AQYSSEYEI---------------- 368

  Fly   738 MSHYSPHHPHHRSLIDCPAEAAYSPPVANNQAYLASNGAVQQLDLSTYHGHANHQLHQHPPSATH 802
                         |.:...|..|.....|  |.:|       ::::...|               
  Fly   369 -------------LTESEMEEKYQADADN--AEIA-------IEMTRLLG--------------- 396

  Fly   803 PSHSQSSPHYPSASGA-GAGAGSVSVSIAGSASGSATSAPA-SVATSAVSP-----------QPS 854
                       :|||. |||:|.|   :..|..||||:.|: :|:.:.|..           :|.
  Fly   397 -----------TASGTPGAGSGQV---MEDSGGGSATTGPSTTVSVTQVKSDSKASGTNAALKPG 447

  Fly   855 SSSTGSTSSAAAVAAAAAAAANRRDHNIDYSTLFVQLSGTLPTLYRCVSCNKIVSN----RWHHA 915
            |.:...:|.:.|.|:|..|.::...         ||.:|..|  ..|..|.:.:.:    |.|.|
  Fly   448 SVTVARSSKSGATASAPPAGSDEES---------VQYTGLAP--LNCSFCGRPLKSVNALRRHIA 501

  Fly   916 NIH---RPQSHECPVCGQKFTRRDNMKAH---------C------KIKHAD 948
            :.|   :.:.|||.:|.:.|..:.::..|         |      ||:::|
  Fly   502 SRHSEIQGKEHECFICMKSFKTKWSLSTHNSRFHREMGCSTKGFTKIEYSD 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fruNP_001163648.1 BTB 126..221 CDD:279045 43/94 (46%)
BTB 137..221 CDD:197585 42/83 (51%)
C2H2 Zn finger 901..918 CDD:275368 5/20 (25%)
C2H2 Zn finger 925..944 CDD:275368 5/33 (15%)
CG12236NP_727050.1 BTB 22..116 CDD:279045 42/93 (45%)
BTB 33..116 CDD:197585 41/82 (50%)
Herpes_capsid <376..467 CDD:283714 27/128 (21%)
C2H2 Zn finger 483..512 CDD:275371 6/28 (21%)
C2H2 Zn finger 514..535 CDD:275371 4/20 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 68 1.000 Domainoid score I9675
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1229475at2759
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
55.020

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