DRSC/TRiP Functional Genomics Resources

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Protein Alignment fru and Btbd18

DIOPT Version :9

Sequence 1:NP_001163648.1 Gene:fru / 42226 FlyBaseID:FBgn0004652 Length:960 Species:Drosophila melanogaster
Sequence 2:XP_002729248.1 Gene:Btbd18 / 100363270 RGDID:2323370 Length:724 Species:Rattus norvegicus


Alignment Length:759 Identity:144/759 - (18%)
Similarity:224/759 - (29%) Gaps:266/759 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 QREALCDVTLACEGETVKAHQTILSACSPYFETIFLQNQHP----HPIIYLKDVRYSEMRSLLDF 191
            |....||..|..|||.|.||..|||||||:| |..|:.:.|    ..::.|..::...:|.|:||
  Rat    29 QSGVFCDALLQAEGEAVPAHCCILSACSPFF-TERLERERPVQGRKVVLELGGLKIQTLRKLVDF 92

  Fly   192 MYKGEVNVGQSSLPMFLKTAESLQVRGLTDNNNLNYRSDCDKLR---DSAASSPTGRGPSNYTGG 253
            :|..|:.|.|......|..|..|:|            |:.:.|:   .....:|.||        
  Rat    93 LYTSEMEVSQEEAQDVLSAARQLRV------------SELETLQLEGGKLVKAPQGR-------- 137

  Fly   254 LGGAGGVADAMRESRDSLRSRCERDLRDELTQRSSSSMSERSSAAAAAAAAAAAVAAAGGNVNAA 318
                       |.:|:.|:                         ..:||..:|.|..........
  Rat   138 -----------RLNRECLQ-------------------------PPSAAPISARVVVPRSRPRTP 166

  Fly   319 AVALGLTTPTGGERSPSVGSASAAAAAAAVAAAVAAAANRSASADGCSDRGSERGTLERTDSRDD 383
            .......:|.|..:..|:|....|                           .::..|...|:..|
  Rat   167 LPVTQTPSPLGAVKLKSLGEEEGA---------------------------HKKSNLPNADNLSD 204

  Fly   384 LLQLDYS-----NKDNNNSNSSSTGGNNNNNNNNNNNS--------------------------- 416
            .|.|...     .::.::|.||...|...|.:|..:.:                           
  Rat   205 TLLLKKKARVCLTQERSSSPSSQREGPKENKSNPGSTALPSLYPSVDEQLLPRKIRLSRSKPSPH 269

  Fly   417 ------SSNNNNSSSN---------RERNNSGERERERERERERDRDRELST---TP----VEQL 459
                  ||..:..||.         |:|..|     |..:..::.:..|:||   ||    |.:.
  Rat   270 VYTSKPSSMLSGPSSMPTAPGRRLWRQRTVS-----EATQGVDKQKPGEVSTLQSTPDPPDVGKT 329

  Fly   460 SSSKRRRKNSSSNCDNSLSSSHQDR--------------------HYPQDSQANFKSSPVPKTGG 504
            ...|:....|.:...||:......|                    ...|||....:||...:..|
  Rat   330 GGKKQPSPESRAPASNSVEEGQVGRVKLRKIVNGTCWEVVQEPPIRNTQDSPQILESSDADEPPG 394

  Fly   505 ---STSESEDAGGR----HDSP---------LSMTTSVHLGGGGGNVGAASALSGLSQSLSIKQE 553
               |:...::...|    ||||         ||.:.|..........|::..|:|....|:|...
  Rat   395 TLLSSVNEQEIPARIQLCHDSPENSRLQDILLSASHSPDHPVVKSEFGSSPMLTGKEPELNIDCR 459

  Fly   554 ---------LMDAQQQQQHREHHVALPPDYLPSAALKLHAEDMSTLL--------TQHALQAADA 601
                     |....:.:|:|          :.|||.....|::...:        ...:|::..|
  Rat   460 EPYTFDTTLLSQPCEAEQYR----------ITSAAATSELEEILDFMLCGSDVEPPVGSLESPGA 514

  Fly   602 RDEHNDAKQLQLDQTDNIDGRVKCFNIKHDRHPDRELDRNHREHDDDPGVIEEVVVDHVREMEAG 666
            ......:..|.....:.|:|...|.       ||.||...     |..|:.:|.|.::...:|  
  Rat   515 EGCRTPSYHLSETGKNWIEGEEWCL-------PDMELWPR-----DLTGLEKEPVGENKEPVE-- 565

  Fly   667 NEHDPEEMKEAAYHATPPKYRRAVVYAPPHPDEEAASGSGS---DIYV------DGGYNCEYKCK 722
             ...|..|:.....:..|   .:.:..|.....|..|..||   |:.:      ||         
  Rat   566 -PFSPLVMRSENTESIEP---LSPLVMPSEVSREELSLRGSWTPDLEITSSQPLDG--------- 617

  Fly   723 ELNMRAIRCSRQQHMMSHYSPHHPHHRSLIDCPAEAAYSPPVAN 766
                       |...:.|.....|..||..|      .|||..|
  Rat   618 -----------QGEKLIHLDSSDPSQRSYSD------LSPPCPN 644

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fruNP_001163648.1 BTB 126..221 CDD:279045 34/93 (37%)
BTB 137..221 CDD:197585 32/87 (37%)
C2H2 Zn finger 901..918 CDD:275368
C2H2 Zn finger 925..944 CDD:275368
Btbd18XP_002729248.1 BTB 24..123 CDD:279045 35/106 (33%)
BTB 35..123 CDD:197585 33/100 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 59 1.000 Domainoid score I10373
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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