DRSC/TRiP Functional Genomics Resources

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Protein Alignment fru and Btbd18

DIOPT Version :10

Sequence 1:NP_001163648.1 Gene:fru / 42226 FlyBaseID:FBgn0004652 Length:960 Species:Drosophila melanogaster
Sequence 2:NP_001417674.1 Gene:Btbd18 / 100363270 RGDID:2323370 Length:724 Species:Rattus norvegicus


Alignment Length:759 Identity:144/759 - (18%)
Similarity:224/759 - (29%) Gaps:266/759 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 QREALCDVTLACEGETVKAHQTILSACSPYFETIFLQNQHP----HPIIYLKDVRYSEMRSLLDF 191
            |....||..|..|||.|.||..|||||||:| |..|:.:.|    ..::.|..::...:|.|:||
  Rat    29 QSGVFCDALLQAEGEAVPAHCCILSACSPFF-TERLERERPVQGRKVVLELGGLKIQTLRKLVDF 92

  Fly   192 MYKGEVNVGQSSLPMFLKTAESLQVRGLTDNNNLNYRSDCDKLR---DSAASSPTGRGPSNYTGG 253
            :|..|:.|.|......|..|..|:|            |:.:.|:   .....:|.||        
  Rat    93 LYTSEMEVSQEEAQDVLSAARQLRV------------SELETLQLEGGKLVKAPQGR-------- 137

  Fly   254 LGGAGGVADAMRESRDSLRSRCERDLRDELTQRSSSSMSERSSAAAAAAAAAAAVAAAGGNVNAA 318
                       |.:|:.|:                         ..:||..:|.|..........
  Rat   138 -----------RLNRECLQ-------------------------PPSAAPISARVVVPRSRPRTP 166

  Fly   319 AVALGLTTPTGGERSPSVGSASAAAAAAAVAAAVAAAANRSASADGCSDRGSERGTLERTDSRDD 383
            .......:|.|..:..|:|....|                           .::..|...|:..|
  Rat   167 LPVTQTPSPLGAVKLKSLGEEEGA---------------------------HKKSNLPNADNLSD 204

  Fly   384 LLQLDYS-----NKDNNNSNSSSTGGNNNNNNNNNNNS--------------------------- 416
            .|.|...     .::.::|.||...|...|.:|..:.:                           
  Rat   205 TLLLKKKARVCLTQERSSSPSSQREGPKENKSNPGSTALPSLYPSVDEQLLPRKIRLSRSKPSPH 269

  Fly   417 ------SSNNNNSSSN---------RERNNSGERERERERERERDRDRELST---TP----VEQL 459
                  ||..:..||.         |:|..|     |..:..::.:..|:||   ||    |.:.
  Rat   270 VYTSKPSSMLSGPSSMPTAPGRRLWRQRTVS-----EATQGVDKQKPGEVSTLQSTPDPPDVGKT 329

  Fly   460 SSSKRRRKNSSSNCDNSLSSSHQDR--------------------HYPQDSQANFKSSPVPKTGG 504
            ...|:....|.:...||:......|                    ...|||....:||...:..|
  Rat   330 GGKKQPSPESRAPASNSVEEGQVGRVKLRKIVNGTCWEVVQEPPIRNTQDSPQILESSDADEPPG 394

  Fly   505 ---STSESEDAGGR----HDSP---------LSMTTSVHLGGGGGNVGAASALSGLSQSLSIKQE 553
               |:...::...|    ||||         ||.:.|..........|::..|:|....|:|...
  Rat   395 TLLSSVNEQEIPARIQLCHDSPENSRLQDILLSASHSPDHPVVKSEFGSSPMLTGKEPELNIDCR 459

  Fly   554 ---------LMDAQQQQQHREHHVALPPDYLPSAALKLHAEDMSTLL--------TQHALQAADA 601
                     |....:.:|:|          :.|||.....|::...:        ...:|::..|
  Rat   460 EPYTFDTTLLSQPCEAEQYR----------ITSAAATSELEEILDFMLCGSDVEPPVGSLESPGA 514

  Fly   602 RDEHNDAKQLQLDQTDNIDGRVKCFNIKHDRHPDRELDRNHREHDDDPGVIEEVVVDHVREMEAG 666
            ......:..|.....:.|:|...|.       ||.||...     |..|:.:|.|.::...:|  
  Rat   515 EGCRTPSYHLSETGKNWIEGEEWCL-------PDMELWPR-----DLTGLEKEPVGENKEPVE-- 565

  Fly   667 NEHDPEEMKEAAYHATPPKYRRAVVYAPPHPDEEAASGSGS---DIYV------DGGYNCEYKCK 722
             ...|..|:.....:..|   .:.:..|.....|..|..||   |:.:      ||         
  Rat   566 -PFSPLVMRSENTESIEP---LSPLVMPSEVSREELSLRGSWTPDLEITSSQPLDG--------- 617

  Fly   723 ELNMRAIRCSRQQHMMSHYSPHHPHHRSLIDCPAEAAYSPPVAN 766
                       |...:.|.....|..||..|      .|||..|
  Rat   618 -----------QGEKLIHLDSSDPSQRSYSD------LSPPCPN 644

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fruNP_001163648.1 BTB_POZ_BAB-like 135..218 CDD:349624 33/86 (38%)
C2H2 Zn finger 901..918 CDD:275368
C2H2 Zn finger 925..944 CDD:275368
Btbd18NP_001417674.1 None
Blue background indicates that the domain is not in the aligned region.

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