DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fru and Btbd18

DIOPT Version :10

Sequence 1:NP_001163648.1 Gene:fru / 42226 FlyBaseID:FBgn0004652 Length:960 Species:Drosophila melanogaster
Sequence 2:NP_001138572.1 Gene:Btbd18 / 100270744 MGIID:3650217 Length:723 Species:Mus musculus


Alignment Length:723 Identity:147/723 - (20%)
Similarity:227/723 - (31%) Gaps:253/723 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 QREALCDVTLACEGETVKAHQTILSACSPYFETIFLQNQHP----HPIIYLKDVRYSEMRSLLDF 191
            |....||..|..|||.|.||..|||||||:| |..|:.:.|    ..::.:..::...:|.|:||
Mouse    29 QSGVFCDALLQAEGEAVPAHCCILSACSPFF-TERLERERPVQGRKVVLEMGGLKIQTLRKLVDF 92

  Fly   192 MYKGEVNVGQSSLPMFLKTA--------ESLQVRG-----LTDNNNLNYRSDCDKLRDSAASSPT 243
            :|..|:.|.|......|..|        |:||:.|     ......||  .:|  |:..||:..:
Mouse    93 LYTSEMEVSQEEAQDVLSAARQLRVSELETLQLEGGKLVKAPQGRRLN--REC--LQPPAAAPIS 153

  Fly   244 GR--GPSN------------------YTGGLGGAGGV--------ADAMRESRDSLRSR-CERDL 279
            .|  ||.:                  ....||...|.        ||::.:::...::| |    
Mouse   154 ARVVGPKSRPQTPLPVTQTPSPLGAVRLKSLGEEEGAHKKTNLPNADSLSDTQLKKKARVC---- 214

  Fly   280 RDELTQRSSSSMSERSSAAAAAAAAAAAVAAAGGNVNAAAVALGLTTPTGGER------------ 332
               |||.|.||.|.:........:            |....||....|:..|:            
Mouse   215 ---LTQESRSSPSSQREGPKETKS------------NPGPTALPSLYPSVDEQLLPRKIRLSRSK 264

  Fly   333 -SPSVGSASAAAAAAAVAAAVAAAANR-------SASADGC-SDRGSERGTLERTDSRDDLLQLD 388
             ||.|.:::.::..:..::...|...|       |..|.|. ..:..|...|:.|....|:    
Mouse   265 PSPHVYTSTPSSILSGPSSMPTAPGRRLWRQRTVSKEAQGVDKQKPGEVRPLQSTPDPSDV---- 325

  Fly   389 YSNKDNNNSNSSSTGGNNNNNNNNNNNSSSNNNNSSSNRERNNSG-------------ERERERE 440
                              .....|...|......:||:.|....|             |..:|..
Mouse   326 ------------------GKPAENKKQSPELRAPTSSSVEEGQVGRVKLRKIVNGTCWEVVQEPP 372

  Fly   441 RERERDRDRELSTTPVEQLSSSKRRRKNSS------SNCDNS----------LSSSHQDRHYPQD 489
            ....:|..:.|..:.||:.|.:.....|..      ..|.:|          ||:||...|....
Mouse   373 LRNTQDSPQILEPSDVEEPSGTLLSSVNEQEIPARIQLCQDSPESPRLQDILLSASHSPDHPMVK 437

  Fly   490 SQANFKSSPV--------------PKT-------------------GGSTSESED------AGGR 515
            |:  |.|||:              |.|                   ..:|||.|:      .|..
Mouse   438 SE--FGSSPMLTGKESDLNIDCREPYTFDTTLLGQPCEAEQYRITSAAATSELEEIFDFMLCGSD 500

  Fly   516 HDSPLS----------MTTSVHLGGGGGNVGAASA------------LSGL-SQSLSIKQELMD- 556
            .:.|:.          .|.|.||...|.|......            |:|| .:.:|..:|.:: 
Mouse   501 VEPPVGSLESPGAEGCRTPSYHLSETGKNWIEGEEWCLPDMELWPRDLTGLEKEPVSENKEPVEP 565

  Fly   557 ---AQQQQQHREHHVALPPDYLPSAALKLHAEDMSTL------LTQHALQAADARDEHNDAKQLQ 612
               ...:.::.|....|.|..:||   ::..|::|..      |...:.|..|.:.|    |.|.
Mouse   566 FSPLVMRSENTESFEPLSPLVMPS---EVSREELSLRGSWTPDLEITSSQPLDGQGE----KLLH 623

  Fly   613 LDQTDNIDGRVKCFNIKHDRHP-------------------------DRELDRNHREHDDDPGVI 652
            .|.:|...   :.:|  |...|                         .||:..|..:.|..||..
Mouse   624 FDSSDPSQ---RSYN--HLSPPCSDWAETGLEVSLGMDDVLCPVPKAVREVSANPEQLDPLPGSS 683

  Fly   653 EEVVVDHV 660
            |:..:|.|
Mouse   684 EDEEIDVV 691

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fruNP_001163648.1 BTB_POZ_BAB-like 135..218 CDD:349624 33/94 (35%)
C2H2 Zn finger 901..918 CDD:275368
C2H2 Zn finger 925..944 CDD:275368
Btbd18NP_001138572.1 BTB_POZ_BTBD18 20..138 CDD:349602 35/109 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 150..176 3/25 (12%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 188..350 34/202 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 370..394 6/23 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 603..637 9/42 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 699..723
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.