DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wdr37 and YTM1

DIOPT Version :10

Sequence 1:NP_650723.1 Gene:Wdr37 / 42218 FlyBaseID:FBgn0038617 Length:487 Species:Drosophila melanogaster
Sequence 2:NP_014915.3 Gene:YTM1 / 854446 SGDID:S000005798 Length:460 Species:Saccharomyces cerevisiae


Alignment Length:395 Identity:97/395 - (24%)
Similarity:167/395 - (42%) Gaps:59/395 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 VAGSFLAAASSTHKSLKAKLSSATGGSKAKASNKIKAQTSRIVSSFKAPTVVSTVVREFGGHKDG 162
            :.|..|  .:|.|..|..|      |..::||..::...:.:..|:         :..| .::|.
Yeast    59 IEGELL--RTSLHDYLTKK------GLSSEASLNVEYTRAILPPSY---------LNSF-SNEDW 105

  Fly   163 IWQVAAKAGQPIIGTASADHTACIWGVESARCLLQYQGHAGSVNSIKFHQQRDLVLTGSGDGTAH 227
            :..:....|...|.:.|.|.....|.: |.....||.||:|.:.::|:.....||..|: |.|..
Yeast   106 VSSLDVGDGSKHIISGSYDGIVRTWDL-SGNVQKQYSGHSGPIRAVKYISNTRLVSAGN-DRTLR 168

  Fly   228 IWQAAVNWEVPKKGHSSEEELDDSDEQVEDRDRVDTLRTPLCEFTGPGGHLSVVVAADWLSSMDQ 292
            :|:.. |.::........:|.||.:..:||...:..|.          ||.:.||:.| :|...:
Yeast   169 LWKTK-NDDLKLTSQQQAQEDDDDEVNIEDGKTLAILE----------GHKAPVVSID-VSDNSR 221

  Fly   293 IITGSWDRTAILW-----DVETGLPLQPLTGHDHELTHVSAHPTQRLVVTASRDTTFRLWDFREA 352
            |::.|:|.:...|     ::....||:.:...::::: .:|...::|.:   :|.|.|    |.|
Yeast   222 ILSASYDNSIGFWSTIYKEMTVVDPLEDINNPNNKIS-TAARKRRKLTM---KDGTIR----RRA 278

  Fly   353 IPAVSVFQGHTETVTSSVFARDDKVV--SGSDDRTIKVWELRNMRSALATIRTDSSVNRLA-VST 414
              .:|:.:.||..|...:|...|..|  |.|.|.|||.|:|...| .:.|..|..|:..:| :||
Yeast   279 --PLSLLESHTAPVEQVIFDSTDNTVGYSVSQDHTIKTWDLVTAR-CIDTRTTSYSLLSIAQLST 340

  Fly   415 GGIIAIPHDNRQIRLFDLNGQRVARLPRTSRQ---GHRRMVSSVAWAEEPLLDCDLFSCGFDRRV 476
            ..::|.....|.|.|.|   .||....:.::|   ||:..|||:....|.  :..|.|...|..|
Yeast   341 LNLLACGSSARHITLHD---PRVGASSKVTQQQLIGHKNFVSSLDTCPEN--EYILCSGSHDGTV 400

  Fly   477 FGWSI 481
            ..|.:
Yeast   401 KVWDV 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wdr37NP_650723.1 WD40 153..476 CDD:238121 85/333 (26%)
WD40 repeat 164..200 CDD:293791 8/35 (23%)
WD40 repeat 205..274 CDD:293791 14/68 (21%)
WD40 repeat 282..317 CDD:293791 9/39 (23%)
WD40 repeat 323..360 CDD:293791 8/36 (22%)
WD40 repeat 366..403 CDD:293791 14/38 (37%)
WD40 repeat 407..430 CDD:293791 6/23 (26%)
WD40 repeat 452..481 CDD:293791 9/28 (32%)
YTM1NP_014915.3 NLE 8..72 CDD:462380 4/14 (29%)
WD40 103..451 CDD:238121 86/333 (26%)
WD40 repeat 106..142 CDD:293791 8/36 (22%)
WD40 repeat 148..206 CDD:293791 14/69 (20%)
WD40 repeat 242..284 CDD:293791 10/51 (20%)
WD40 repeat 290..326 CDD:293791 13/36 (36%)
WD40 repeat 332..372 CDD:293791 11/42 (26%)
WD40 repeat 378..403 CDD:293791 8/26 (31%)

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