DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wdr37 and Wdr37

DIOPT Version :9

Sequence 1:NP_650723.1 Gene:Wdr37 / 42218 FlyBaseID:FBgn0038617 Length:487 Species:Drosophila melanogaster
Sequence 2:XP_038951693.1 Gene:Wdr37 / 307075 RGDID:1306189 Length:496 Species:Rattus norvegicus


Alignment Length:511 Identity:244/511 - (47%)
Similarity:319/511 - (62%) Gaps:66/511 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KASKTRAVRLTSLTE-DVAAVPED----------APFRARLHVLFAQIEREFEQLYLENQALQEK 55
            :.|.:.::|.|:.:| :...:|.:          :..|:.|..||.|||||||.||:||..|:.:
  Rat    18 RKSHSLSIRRTNSSEQERTGLPREMLEGQDSKLPSSVRSTLLELFGQIEREFENLYIENLELRRE 82

  Fly    56 LDIATTTKESLIPPDARSAAGGSMSTQASSAALATPATQTDEVAGSFLAAASSTHKSLKAKLSSA 120
            :|   :..|.|        ||                      .|..:..|..:...||.|.|.:
  Rat    83 ID---SLNERL--------AG----------------------EGQAIDGAELSKGQLKTKASHS 114

  Fly   121 TGGSKAKASNKIKAQTSRIVSSFKAPT--VVSTVVREFGGHKDGIWQVAAKAGQPII-GTASADH 182
            |.....|.....||.||:||||||..|  .:..:|:|:.||:||||.|:....|||: |||||||
  Rat   115 TSQLSQKLKTTYKASTSKIVSSFKTTTSRAICQLVKEYIGHRDGIWDVSVARTQPIVLGTASADH 179

  Fly   183 TACIWGVESARCLLQYQGHAGSVNSIKFHQQRDLVLTGSGDGTAHIWQAAVNWEVPKKGHSSEEE 247
            ||.:|.:|:.:||::|.||.|||||||||....|.||.|||.|||||:..|....|:....:.::
  Rat   180 TALLWSIETGKCLVKYAGHVGSVNSIKFHPSEQLALTASGDQTAHIWRYVVQLPTPQPVADTSQQ 244

  Fly   248 LDDSDE-QVEDRDRVD----------TLRTPLCEFTGPGGHLSVVVAADWLSSMDQIITGSWDRT 301
            :...|| :..|:|..|          |:|.||   |....|..||:|||||....|::|.|||||
  Rat   245 ISGEDEIECSDKDEPDLDGDVSSDCPTVRVPL---TSLKSHQGVVIAADWLVGGKQVVTASWDRT 306

  Fly   302 AILWDVETGLPLQPLTGHDHELTHVSAHPTQRLVVTASRDTTFRLWDFRE-AIPAVSVFQGHTET 365
            |.|:||||...:..|||||.||||...|||||||||:||||||||||||: :|.:|:||||||:|
  Rat   307 ANLYDVETSELVHSLTGHDQELTHCCTHPTQRLVVTSSRDTTFRLWDFRDPSIHSVNVFQGHTDT 371

  Fly   366 VTSSVFARDDKVVSGSDDRTIKVWELRNMRSALATIRTDSSVNRLAVSTG-GIIAIPHDNRQIRL 429
            |||:||...|.|||||||||:|||:|:||||.:|||||||::||:.|..| .|||:||||||:||
  Rat   372 VTSAVFTVGDNVVSGSDDRTVKVWDLKNMRSPIATIRTDSAINRINVCVGQKIIALPHDNRQVRL 436

  Fly   430 FDLNGQRVARLPRTSRQGHRRMVSSVAWAEE-PLLDCDLFSCGFDRRVFGWSIVLP 484
            ||::|.|:|||||:|||||||||...||:|: |:  |:||:|||||:..||:|.:|
  Rat   437 FDMSGVRLARLPRSSRQGHRRMVCCSAWSEDHPI--CNLFTCGFDRQAIGWNINIP 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wdr37NP_650723.1 WD40 153..476 CDD:238121 195/337 (58%)
WD40 repeat 164..200 CDD:293791 19/36 (53%)
WD40 198..>481 CDD:225201 172/296 (58%)
WD40 repeat 205..274 CDD:293791 30/79 (38%)
WD40 repeat 282..317 CDD:293791 18/34 (53%)
WD40 repeat 323..360 CDD:293791 27/37 (73%)
WD40 repeat 366..403 CDD:293791 26/36 (72%)
WD40 repeat 407..430 CDD:293791 14/23 (61%)
WD40 repeat 452..481 CDD:293791 15/29 (52%)
Wdr37XP_038951693.1 WD40 128..438 CDD:238121 174/325 (54%)
WD40 repeat 203..281 CDD:293791 35/88 (40%)
WD40 repeat 286..322 CDD:293791 18/35 (51%)
WD40 repeat 329..366 CDD:293791 28/36 (78%)
WD40 repeat 372..407 CDD:293791 26/34 (76%)
WD40 repeat 413..451 CDD:293791 24/38 (63%)
WD40 repeat 458..485 CDD:293791 16/27 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166341560
Domainoid 1 1.000 127 1.000 Domainoid score I5272
eggNOG 1 0.900 - - E2759_KOG0300
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H40914
Inparanoid 1 1.050 382 1.000 Inparanoid score I1981
OMA 1 1.010 - - QHG52450
OrthoDB 1 1.010 - - D1338925at2759
OrthoFinder 1 1.000 - - FOG0004215
OrthoInspector 1 1.000 - - oto98654
orthoMCL 1 0.900 - - OOG6_105847
Panther 1 1.100 - - LDO PTHR19855
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4028
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.810

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