DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wdr37 and wdr-37

DIOPT Version :9

Sequence 1:NP_650723.1 Gene:Wdr37 / 42218 FlyBaseID:FBgn0038617 Length:487 Species:Drosophila melanogaster
Sequence 2:NP_498204.1 Gene:wdr-37 / 175774 WormBaseID:WBGene00015470 Length:486 Species:Caenorhabditis elegans


Alignment Length:492 Identity:193/492 - (39%)
Similarity:266/492 - (54%) Gaps:84/492 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 EDAPFRARLHVLFAQIEREFEQLYLENQALQEKLDIATTTKESLIPPDARSAAGGSMSTQASSAA 87
            :|||:||||:.||..||:||:.||.||.||..:..|...|:                 |:..:|.
 Worm    41 DDAPYRARLYQLFGHIEKEFDTLYAENCALSVRARIVQLTQ-----------------TEGEAAN 88

  Fly    88 LATPATQTDEVAGSFLAAASSTHKSLK--AKLSSATGGSKAKASNKIKAQTSRIVSSFKAPTVVS 150
            :.     ..||.| ...:..|:.|:::  .||.:|..|........ |.:.||::.         
 Worm    89 VV-----AQEVFG-VQESGKSSRKAIQMGQKLRTALRGPPVFRDGS-KFRLSRLLE--------- 137

  Fly   151 TVVREFGGHKDGIWQVAAKAGQPIIGTASADHTACIWGVESARCLLQYQGHAGSVNSIKFHQQRD 215
                   |||||:|.|||.:.:.|..:||||.||.||.:||..||..|.||.||||.:.......
 Worm   138 -------GHKDGVWHVAADSTRNICASASADQTARIWSLESGACLATYTGHTGSVNCVAISNNCA 195

  Fly   216 -------------LVLTGSGDGTAHIWQAAVNWEVPKKGHSSEEELD-----------------D 250
                         |:.|.|||.:.|||:...| ..| ..||||||.:                 .
 Worm   196 VDSTEGSGPASGLLLATASGDESTHIWKVPSN-NAP-SDHSSEEEEEHHRDPNNLLGVVEHNRFT 258

  Fly   251 SDEQVEDRDRVDTLRTPLCEFTGPGGHLSVVVAADWLSSMDQIITGSWDRTAILWDVETGLPLQP 315
            |..:..|..|:   |.|:...|   ||.:.|...:||:...|::|.||||||.:||||.|..:..
 Worm   259 SSSEKSDGHRI---RVPVMRLT---GHRAPVSCCEWLAGGQQMVTASWDRTANVWDVEKGEVVNI 317

  Fly   316 LTGHDHELTHVSAHPTQRLVVTASRDTTFRLWDFREAIPAVSVFQGHTETVTSSVFARDDKVVSG 380
            |:||:.||.|.|.|..|:||:|:|:|:|||||||||||.:|:|||||.::|||..|..|.::||.
 Worm   318 LSGHESELNHCSTHSNQKLVLTSSKDSTFRLWDFREAIQSVAVFQGHQDSVTSVSFNTDYRIVSS 382

  Fly   381 SDDRTIKVWELRNMRSALATIRTDSSVNRLAVS-TGGIIAIPHDNRQIRLFDLNGQRVARLPRTS 444
            |||.|:|:|:|||||:.|||||..|..||:|:| :..:||||.|||.:|::||||.|:.|:|  :
 Worm   383 SDDATVKIWDLRNMRTPLATIRLSSPANRVAISKSHPVIAIPMDNRHVRIYDLNGNRLPRMP--N 445

  Fly   445 RQGHRRMVSSVAWAEEPLLDCDLFSCGFDRRVFGWSI 481
            |:.|.|||:..||.:|...: :|.:.||||.|..|.:
 Worm   446 RRCHERMVTCCAWLDEHPAN-NLLTAGFDRMVAAWKV 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wdr37NP_650723.1 WD40 153..476 CDD:238121 156/353 (44%)
WD40 repeat 164..200 CDD:293791 18/35 (51%)
WD40 198..>481 CDD:225201 136/313 (43%)
WD40 repeat 205..274 CDD:293791 24/98 (24%)
WD40 repeat 282..317 CDD:293791 15/34 (44%)
WD40 repeat 323..360 CDD:293791 23/36 (64%)
WD40 repeat 366..403 CDD:293791 22/36 (61%)
WD40 repeat 407..430 CDD:293791 12/23 (52%)
WD40 repeat 452..481 CDD:293791 11/28 (39%)
wdr-37NP_498204.1 WD40 131..392 CDD:238121 114/284 (40%)
WD40 repeat 186..278 CDD:293791 23/99 (23%)
WD40 repeat 283..319 CDD:293791 16/35 (46%)
PTZ00420 307..>486 CDD:240412 94/178 (53%)
WD40 repeat 326..362 CDD:293791 22/35 (63%)
WD40 repeat 368..403 CDD:293791 20/34 (59%)
WD40 repeat 409..445 CDD:293791 19/37 (51%)
WD40 repeat 453..479 CDD:293791 10/26 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159709
Domainoid 1 1.000 85 1.000 Domainoid score I5228
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H40914
Inparanoid 1 1.050 305 1.000 Inparanoid score I1593
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52450
OrthoDB 1 1.010 - - D1338925at2759
OrthoFinder 1 1.000 - - FOG0004215
OrthoInspector 1 1.000 - - oto20124
orthoMCL 1 0.900 - - OOG6_105847
Panther 1 1.100 - - LDO PTHR19855
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4175
SonicParanoid 1 1.000 - - X4028
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1413.940

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