DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Vha100-2 and VHA-A3

DIOPT Version :9

Sequence 1:NP_650722.1 Gene:Vha100-2 / 42216 FlyBaseID:FBgn0028670 Length:834 Species:Drosophila melanogaster
Sequence 2:NP_568051.1 Gene:VHA-A3 / 830063 AraportID:AT4G39080 Length:821 Species:Arabidopsis thaliana


Alignment Length:863 Identity:333/863 - (38%)
Similarity:497/863 - (57%) Gaps:87/863 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DMFRSEEMALCQMFIQPEAAYTSVSELGETGCVQFRDLNVNVNAFQRKFVTEVRRCDELERKIRY 67
            |:.|||.|.|.|:.:..|:|:.:||.||:.|.|||:|||...:.|||.:..:::||.|:.||||:
plant    15 DLMRSETMQLVQLIVPMESAHLTVSYLGDLGLVQFKDLNSEKSPFQRTYAAQIKRCGEMARKIRF 79

  Fly    68 IETEIKKDGIVLPDIQDDIPRAPNPREIIDLEAHLEKTESEMIELAQNEVNMKSNYLELTELRKV 132
            ...::.|.|:...::|.    ..|..::.|:|..|.:.|:|::|:..|...::.:|.||.|.:.|
plant    80 FRDQMSKAGVPAKEMQG----KENDIDLDDVEVKLGELEAELVEINANNDKLQRSYNELMEYKLV 140

  Fly   133 LENTQGFFSDQEVLNLDSSNRAGGD--NDAAAQHRG---------------------RLGFVAGV 174
            |:....|||        |::|:..|  .:..:|..|                     :|||:.|:
plant   141 LQKAGEFFS--------SAHRSAADQQRETESQQAGEDLLESPLLQEEKSIDSTKQVKLGFLTGL 197

  Fly   175 INRERVFAFERMLWRISRGNVFLKRSDLDEPLNDPATGHPIYKTVFVAFFQGEQLKNRIKKVCTG 239
            :.||:...|||:|:|.:|||:|::::.::||:.||.:|....|.|||.|:.||:.|::|.|:|..
plant   198 VPREKSMVFERILFRATRGNIFIRQTVIEEPVIDPNSGEKAEKNVFVVFYSGERAKSKILKICEA 262

  Fly   240 FHASLYPCPSSHNEREEMVRNVRTRLEDLKLVLSQTEDHRSRVLATVSKNLPSWSIMVKKMKAIY 304
            |.|:.||.......:.:|:..|..||.:||..:......|:.:|.|:......|::.|:|.||||
plant   263 FGANRYPFSEDLGRQAQMITEVSGRLSELKTTIDAGLGQRNILLQTIGDKFELWNLKVRKEKAIY 327

  Fly   305 HTLNLFNMDVTKKCLIGECWVPTNDLPVVQKALSDGSAAVGSTIPSFLNVIDTNEQPPTFNRTNK 369
            ||||:.::|||||||:.|.|.|......:|.||...:....|.:.|...|:.|.|.|||:.||||
plant   328 HTLNMLSLDVTKKCLVAEGWSPVFASREIQDALQRAAVDSNSQVGSIFQVLRTKESPPTYFRTNK 392

  Fly   370 FTRGFQNLIDAYGVASYRECNPALYTCITFPFLFAVMFGDLGHGLILVLFGAWMVLCERKLARIR 434
            ||...|.::||||||.|:|.||.::|.:||||||||||||.|||:.::|...:::|.|:|||. :
plant   393 FTSAIQEIVDAYGVAKYQEANPGVFTIVTFPFLFAVMFGDWGHGICILLATMYLILKEKKLAS-Q 456

  Fly   435 NGGEIWNIFFGGRYIILLMGLFAMYTGLVYNDVFSKSMNLFGSRWFNNYNTTTVLTNPNLQLPPN 499
            ..|:|..:.|||||:||:|.||::||||:||:.||....||..   :.|:...|..:       .
plant   457 KLGDIMEMAFGGRYVILMMSLFSIYTGLIYNEFFSIPFPLFAP---SAYDCRDVSCS-------E 511

  Fly   500 SSAVGV------YPFGMDPVWQLADNKIIFLNSFKMKLSIIFGVLHMVFGVCMSVVNFTHFKRYA 558
            ::.:|:      ||||:||||..:.:::.||||.|||:||:.||..|..|:.||..|...||...
plant   512 ATTIGLIKVRDTYPFGLDPVWHGSRSELPFLNSLKMKMSILLGVSQMNLGIIMSYFNARFFKSSV 576

  Fly   559 SIFLEFVPQILFLLLLFGYMVFMMFFKWFSYNARTSFQPETPGCAPSVLIMF-INMMLFKNTEPP 622
            :|:.:|:||::||..||||:..::..||               |..|...:: :.:.:|.:....
plant   577 NIWFQFIPQMIFLNSLFGYLSVLIIIKW---------------CTGSQADLYHVMIYMFLSPMDE 626

  Fly   623 KGCNEFMFESQPQLQKAFVLIALCCIPWMLLGKPLYIKFTRKNKAH-ANHNGQLTGNIELAEGET 686
            .|.|: :|..|..||...:.:||..:|.|||.||..:|     |.| |.|.||....::  |.:.
plant   627 LGENQ-LFPHQKTLQLVLLFLALVSVPCMLLPKPFILK-----KQHEARHQGQAYAPLD--ETDE 683

  Fly   687 PLPTGFSGNEENAGGAHGHDDEPMSEIYIHQAIHTIEYVLSTISHTASYLRLWALSLAHAQLSEV 751
            .|..     |.|.||:|||::...|||::||.|||||:||..:|:||||||||||||||::||.|
plant   684 SLHV-----ETNGGGSHGHEEFEFSEIFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSV 743

  Fly   752 LWQMVLSLGLKMSGVGGAIGLFIIFGAWCLFTLAILVLMEGLSAFLHTLRLHWVEFMSKFYEGMG 816
            .::.||.|..   |....:.|.:....:...|:.:|::||.||||||.||||||||.:|||||.|
plant   744 FYEKVLLLAW---GYNNPLILIVGVLVFIFATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDG 805

  Fly   817 YAFQPFSFKAILDGEEEE 834
            |.|.||:|  |....|:|
plant   806 YKFAPFTF--IFTANEDE 821

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha100-2NP_650722.1 V_ATPase_I 28..824 CDD:279793 318/826 (38%)
NtpI 35..825 CDD:224188 315/820 (38%)
VHA-A3NP_568051.1 NtpI 17..814 CDD:224188 329/852 (39%)
V_ATPase_I 40..813 CDD:279793 318/826 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 601 1.000 Domainoid score I37
eggNOG 1 0.900 - - E1_COG1269
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H39904
Inparanoid 1 1.050 618 1.000 Inparanoid score I211
OMA 1 1.010 - - QHG53812
OrthoDB 1 1.010 - - D181796at2759
OrthoFinder 1 1.000 - - FOG0000328
OrthoInspector 1 1.000 - - mtm1001
orthoMCL 1 0.900 - - OOG6_100301
Panther 1 1.100 - - O PTHR11629
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X226
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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