DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha100-2 and tcirg1

DIOPT Version :10

Sequence 1:NP_650722.1 Gene:Vha100-2 / 42216 FlyBaseID:FBgn0028670 Length:834 Species:Drosophila melanogaster
Sequence 2:XP_012809053.3 Gene:tcirg1 / 549603 XenbaseID:XB-GENE-5721917 Length:865 Species:Xenopus tropicalis


Alignment Length:846 Identity:378/846 - (44%)
Similarity:530/846 - (62%) Gaps:43/846 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGDMFRSEEMALCQMFIQPEAAYTSVSELGETGCVQFRDLNVNVNAFQRKFVTEVRRCDELERKI 65
            ||.:||.|||.|.|:|:|..:.|..||.|||.|.|:|||||.|||:|||::|:|:|||||:|...
 Frog    43 MGSLFRGEEMCLAQLFLQSGSEYQCVSALGELGLVEFRDLNQNVNSFQRRYVSEIRRCDEMETTF 107

  Fly    66 RYIETEIKKDGIVLPDIQDDIPRAPNPREIIDLEAHLEKTESEMIELAQNEVNMKSNYLELTELR 130
            .|:|.|::|.|:.:|: .:..|.||.||:.|.::...|:...|:.|::||...::....||.|..
 Frog   108 SYLERELRKAGVQVPE-SEMSPPAPLPRDAIRMQEESEQLAKELREVSQNRQTLQERLRELLEYA 171

  Fly   131 KVLENTQGFFSDQEVLNLDSSNRAGGDN--DAAAQHRG--RLGFVAGVINRERVFAFERMLWRIS 191
            .:|..:|.|............:|:..|.  |.|..::.  |:.|:||||:..|:.:|||:|||..
 Frog   172 NILRESQRFTGPLLESEAQWKDRSEDDPLLDPAVVNKQDLRVSFMAGVIHPWRMNSFERLLWRAC 236

  Fly   192 RGNVFLKRSDLDEPLNDPATGHPIYKTVFVAFFQGEQLKNRIKKVCTGFHASLYPCPSSHNEREE 256
            ||.:.:...::.||:.|..||..:.:.:|:..:.||::..:|||:...||..:||.......|.|
 Frog   237 RGYLIVNFVEMSEPMEDLVTGESVTQIIFLISYWGEKIGEKIKKIANCFHCHIYPYADDETSRLE 301

  Fly   257 MVRNVRTRLEDLKLVLSQTEDHRSRVLATVSKNLPSWSIMVKKMKAIYHTLNLFNMDVTKKCLIG 321
            .:||:..:::|::.||.|||.:.|:||:..:..|..|.:.|:|||.||..|||  ..|.::||||
 Frog   302 TLRNLLVQIQDMQKVLLQTEGYLSQVLSRAASALHHWRVSVRKMKHIYLILNL--CSVRERCLIG 364

  Fly   322 ECWVPTNDLPVVQKALSDGSAAVGSTIPSFLNVIDTNEQPPTFNRTNKFTRGFQNLIDAYGVASY 386
            |.|.|..|||::|.||:..|.:.|....||.:.|.....|||..||||||.|||.::||||||:|
 Frog   365 EVWCPVVDLPLLQSALTRASESSGGGGESFCHRIPCAFSPPTLIRTNKFTSGFQGIVDAYGVATY 429

  Fly   387 RECNPALYTCITFPFLFAVMFGDLGHGLILVLFGAWMVLCERKLARIRNGGEIWNIFFGGRYIIL 451
            :|.|||:::.|||||||||||||:|||.|:.||..|:||.|......|:..||:::.|||||:||
 Frog   430 QEVNPAIFSIITFPFLFAVMFGDVGHGAIMFLFALWLVLGENDPKLRRSEDEIFSMCFGGRYLIL 494

  Fly   452 LMGLFAMYTGLVYNDVFSKSMNLFGSRW-------FNNYNTTTVLTNPNLQLPPNSSAV--GVYP 507
            |||..::|||.|||:.||:...:|.|.|       .||:.:.::...|.:.|.||.:.|  ..||
 Frog   495 LMGALSVYTGFVYNECFSRPAVIFNSGWSVASMARANNWTSDSINKLPPIPLNPNITGVFTAPYP 559

  Fly   508 FGMDPVWQLADNKIIFLNSFKMKLSIIFGVLHMVFGVCMSVVNFTHFKRYASIFLEFVPQILFLL 572
            ||:||:|.||.|::.||||||||:|:|.||.||.||||:||.||.||::...|||..:|::||||
 Frog   560 FGIDPIWSLAVNRLTFLNSFKMKMSVILGVCHMAFGVCLSVFNFVHFRQIYRIFLITLPELLFLL 624

  Fly   573 LLFGYMVFMMFFKWFSYNARTSFQPETPGCAPSVLIMFINMMLFKNTEPPKGCNEFMFESQPQLQ 637
            .||||:|||:.:||....|      |....|||:||.||:|.||  |:.|.  |..:::.|..:|
 Frog   625 CLFGYLVFMVVYKWIVLTA------EDAEWAPSILIHFIDMFLF--TQNPG--NRDLYQGQQVVQ 679

  Fly   638 KAFVLIALCCIPWMLLGKPLYIKFTRKNKAHANHNGQLT---GNIE-LAEGETPLPTGFSGNEEN 698
            ...|::|:.|||.:|||.|:.:....::|..::|..:.:   |:.| |.|.|..:|||       
 Frog   680 TVLVIVAILCIPVLLLGDPICLLIQHRSKKDSSHQNRCSLNNGDREALLEDEITVPTG------- 737

  Fly   699 AGGAHGHDDEPM--SEIYIHQAIHTIEYVLSTISHTASYLRLWALSLAHAQLSEVLWQMVLSLGL 761
                |||..|..  :|:::||.||||||.|..||:||||||||||||||||||||||.||:.:|.
 Frog   738 ----HGHGSEKFDTAEVFMHQMIHTIEYCLGCISNTASYLRLWALSLAHAQLSEVLWNMVIRIGF 798

  Fly   762 KMSGVGGAIGLFIIFGAWCLFTLAILVLMEGLSAFLHTLRLHWVEFMSKFYEGMGYAFQPFSFKA 826
            ....:...|.|..||..:.:.|:|||::|||||||||.||||||||.:|||.|.||.|.||.|:.
 Frog   799 SKLSLTWGIVLVPIFAFFAVLTVAILLIMEGLSAFLHALRLHWVEFQNKFYSGEGYKFFPFCFET 863

  Fly   827 I 827
            :
 Frog   864 M 864

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha100-2NP_650722.1 V_ATPase_I 27..824 CDD:460232 364/815 (45%)
tcirg1XP_012809053.3 V_ATPase_I 69..861 CDD:460232 364/815 (45%)

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