DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Vha100-2 and atp6v0a2

DIOPT Version :9

Sequence 1:NP_650722.1 Gene:Vha100-2 / 42216 FlyBaseID:FBgn0028670 Length:834 Species:Drosophila melanogaster
Sequence 2:NP_001016223.1 Gene:atp6v0a2 / 548977 XenbaseID:XB-GENE-960957 Length:845 Species:Xenopus tropicalis


Alignment Length:871 Identity:399/871 - (45%)
Similarity:544/871 - (62%) Gaps:74/871 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGDMFRSEEMALCQMFIQPEAAYTSVSELGETGCVQFRDLNVNVNAFQRKFVTEVRRCDELERKI 65
            ||..||||.|.|.|:|:|..:||..||||||.|..:|||||..|:|||||||.||::|:|:||.:
 Frog     1 MGSFFRSEAMCLAQLFLQSGSAYDCVSELGEMGLAEFRDLNPQVSAFQRKFVGEVKKCEEMERIL 65

  Fly    66 RYIETEIKKDGIVLPDIQDDIPRAPNPREIIDLEAHLEKTESEMIELAQNEVNMKSNYLELTELR 130
            .|:..||:|..|.:|: :...|.||.|:.::|::..|:|.|.|:.|:.:|:..::.|.||:.|..
 Frog    66 GYLMQEIQKANIPVPE-ESLTPEAPLPKHVLDIQEQLQKLEVELREVNKNKEKLQKNLLEMIEYT 129

  Fly   131 KVL------------ENTQGFFSDQEVLNLDSSNRAGGDNDAAAQHR--GRLGFVAGVINRERVF 181
            .:|            ..|....:.:|...|:..:..    |.....|  .:||||:|:::|.::.
 Frog   130 YMLRVTNYLVHRSNEHETSAHSTYEEFPALEKESLI----DYTCMQRLGAKLGFVSGLVHRAKLE 190

  Fly   182 AFERMLWRISRGNVFLKRSDLDEPLNDPATGHPIYKTVFVAFFQGEQLKNRIKKVCTGFHASLYP 246
            :||:||||:.:|...|...:|||.|..|.|..|....|||..:.|:|:..::||:|..:...|||
 Frog   191 SFEKMLWRVCKGYTVLTYQELDEYLLHPDTEEPTRWFVFVVSYWGDQIGQKVKKICECYDCHLYP 255

  Fly   247 CPSSHNEREEMVRNVRTRLEDLKLVLSQTEDHRSRVLATVSKNLPSWSIMVKKMKAIYHTLNLFN 311
            ..:|..||..::..:.||::||..|:|||:|:..:||...|:::..|.|.:||||||||.||...
 Frog   256 YTNSAEERRNLLSELNTRIQDLHKVISQTDDYLKQVLFKASESVYKWVIQIKKMKAIYHVLNFCR 320

  Fly   312 MDVTKKCLIGECWVPTNDLPVVQKALSDGSAAVGSTIPSFLNVIDTNEQPPTFNRTNKFTRGFQN 376
            .|||.||||.|.|.|..|||.|::||.:||...|.::|||:|.|.:|:.|||..||||||.||||
 Frog   321 FDVTNKCLIAEVWCPVADLPNVRRALEEGSRKSGVSVPSFINRIPSNDTPPTLIRTNKFTSGFQN 385

  Fly   377 LIDAYGVASYRECNPALYTCITFPFLFAVMFGDLGHGLILVLFGAWMVLCER--KLARIRNGGEI 439
            ::|||||.:|||.|||.||.|||||||||||||.|||:::.||...||:.|:  ||||.::  ||
 Frog   386 IVDAYGVGNYREMNPAPYTIITFPFLFAVMFGDFGHGILMSLFALCMVVFEKSPKLARSQD--EI 448

  Fly   440 WNIFFGGRYIILLMGLFAMYTGLVYNDVFSKSMNLFGSRW------FNNYNTTTVLTNPNLQLPP 498
            ...||.|||||||||||::||||:|||.||||||:|||.|      .:|...|..|:|..|.|.|
 Frog   449 MKTFFEGRYIILLMGLFSIYTGLIYNDCFSKSMNIFGSSWNVSAMFSSNVWRTQDLSNKFLTLNP 513

  Fly   499 NSSAV--GVYPFGMDPVWQLADNKIIFLNSFKMKLSIIFGVLHMVFGVCMSVVNFTHFKRYASIF 561
            |.:.|  ||||.|:||:|.|:.|::.||||||||:|:|.||:||.|||.:|..|:.|||:...||
 Frog   514 NVTGVLTGVYPVGIDPIWSLSTNRLSFLNSFKMKMSVILGVIHMTFGVVLSAFNYMHFKKRFCIF 578

  Fly   562 LEFVPQILFLLLLFGYMVFMMFFKWFSYNARTSFQPETPGCAPSVLIMFINMMLF-KNTEPPKGC 625
            |.|:|::||::.:|||:|||:.:||.:|:|..|..      |||:|:.||||.:| ||.:.|.  
 Frog   579 LVFIPELLFMICIFGYLVFMILYKWLAYSAADSRN------APSILLHFINMFMFSKNDQIPA-- 635

  Fly   626 NEFMFESQPQLQKAFVLIALCCIPWMLLGKPLYIKFTRKNKAHANHNGQLTGNIELAEGETPLPT 690
               :|..|..:|...:::...|:|.:|.|||||:.:       .:|.||...|..  :|.|.:. 
 Frog   636 ---LFTGQVGIQIFLIVLVTLCVPVLLFGKPLYLYW-------QHHGGQTLRNYR--KGYTLVR- 687

  Fly   691 GFSGNEENAGGAHGHDDE-------------------PMSEIYIHQAIHTIEYVLSTISHTASYL 736
              .|:||.......||.|                   ..:::::.||||||||.|..||:||.||
 Frog   688 --RGSEEEISLVRSHDLEEGEINSSHEVQRDRDKEKFDFADVFMSQAIHTIEYCLGCISNTALYL 750

  Fly   737 RLWALSLAHAQLSEVLWQMVLSLGLKMSGVGGAIGLFIIFGAWCLFTLAILVLMEGLSAFLHTLR 801
            |||||||||||||||||.|::..||.:....|...|..:|..:...|:|||::|||||||||.||
 Frog   751 RLWALSLAHAQLSEVLWGMIMRKGLNVEPSVGVFVLIPLFAVFAFLTIAILLVMEGLSAFLHALR 815

  Fly   802 LHWVEFMSKFYEGMGYAFQPFSFKAI 827
            ||||||.:|||.|.||.|.|||||.|
 Frog   816 LHWVEFQNKFYTGAGYKFNPFSFKHI 841

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha100-2NP_650722.1 V_ATPase_I 28..824 CDD:279793 380/839 (45%)
NtpI 35..825 CDD:224188 376/833 (45%)
atp6v0a2NP_001016223.1 NtpI 27..839 CDD:224188 382/841 (45%)
V_ATPase_I 28..838 CDD:279793 380/839 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D164762at33208
OrthoFinder 1 1.000 - - FOG0000328
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11629
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X226
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.110

Return to query results.
Submit another query.