DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha100-2 and Atp6v0a1

DIOPT Version :9

Sequence 1:NP_650722.1 Gene:Vha100-2 / 42216 FlyBaseID:FBgn0028670 Length:834 Species:Drosophila melanogaster
Sequence 2:XP_017452683.1 Gene:Atp6v0a1 / 29757 RGDID:68405 Length:870 Species:Rattus norvegicus


Alignment Length:893 Identity:459/893 - (51%)
Similarity:607/893 - (67%) Gaps:82/893 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGDMFRSEEMALCQMFIQPEAAYTSVSELGETGCVQFRDLNVNVNAFQRKFVTEVRRCDELERKI 65
            ||::||||||.|.|:|:|.||||..||||||.|.|||||||.:||.||||||.|||||:|::||:
  Rat     1 MGELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRDLNPDVNVFQRKFVNEVRRCEEMDRKL 65

  Fly    66 RYIETEIKKDGIVLPDIQDDIPRAPNPREIIDLEAHLEKTESEMIELAQNEVNMKSNYLELTELR 130
            |::|.||:|..|.:.|..:: |..|.||::|||||:.||.|:|:.|:..|:..:|.|:||||||:
  Rat    66 RFVEKEIRKANIPIMDTGEN-PEVPFPRDMIDLEANFEKIENELKEINTNQEALKRNFLELTELK 129

  Fly   131 KVLENTQGFFSDQEVLN--------LDSSNRAGGDNDAAAQHRGRLGFVAGVINRERVFAFERML 187
            .:|..||.||.:.|:.:        |:.|:.....|:.......|||||||||||||:..|||||
  Rat   130 FILRKTQQFFDEAELHHQQMADPDLLEESSSLLEPNEMGRGAPLRLGFVAGVINRERIPTFERML 194

  Fly   188 WRISRGNVFLKRSDLDEPLNDPATGHPIYKTVFVAFFQGEQLKNRIKKVCTGFHASLYPCPSSHN 252
            ||:.||||||::::::.||.||.||..::|:||:.||||:|||||:||:|.||.|||||||.:..
  Rat   195 WRVCRGNVFLRQAEIENPLEDPVTGDYVHKSVFIIFFQGDQLKNRVKKICEGFRASLYPCPETPQ 259

  Fly   253 EREEMVRNVRTRLEDLKLVLSQTEDHRSRVLATVSKNLPSWSIMVKKMKAIYHTLNLFNMDVTKK 317
            ||:||...|.||::||::||:||||||.|||...:||:..|.|.|:|||||||||||.|:|||:|
  Rat   260 ERKEMASGVNTRIDDLQMVLNQTEDHRQRVLQAAAKNIRVWFIKVRKMKAIYHTLNLCNIDVTQK 324

  Fly   318 CLIGECWVPTNDLPVVQKALSDGSAAVGSTIPSFLNVIDTNEQPPTFNRTNKFTRGFQNLIDAYG 382
            |||.|.|.|..||..:|.||..|:...|||:||.||.:.||:.|||:|:|||||.||||::||||
  Rat   325 CLIAEVWCPVTDLDSIQFALRRGTEHSGSTVPSILNRMQTNQTPPTYNKTNKFTHGFQNIVDAYG 389

  Fly   383 VASYRECNPALYTCITFPFLFAVMFGDLGHGLILVLFGAWMVLCERKLARIRNGGEIWNIFFGGR 447
            :.:|||.|||.||.|||||||||||||.|||:::.||..||||.|.::...:|..|::::.|.||
  Rat   390 IGTYREINPAPYTVITFPFLFAVMFGDFGHGILMTLFAVWMVLRESRILSQKNENEMFSMVFSGR 454

  Fly   448 YIILLMGLFAMYTGLVYNDVFSKSMNLFGSRW-------FNNYNTTTVLTNPNLQLPPNSSAV-- 503
            |||||||||::||||:|||.||||:|:|||.|       ..|:...|:|.:..|||.|....|  
  Rat   455 YIILLMGLFSIYTGLIYNDCFSKSLNIFGSSWSVRPMFTIGNWTEETLLGSSVLQLNPAIPGVFG 519

  Fly   504 GVYPFGMDPVWQLADNKIIFLNSFKMKLSIIFGVLHMVFGVCMSVVNFTHFKRYASIFLEFVPQI 568
            |.||||:||:|.:|.||:.||||||||:|:|.|::||:|||.:|:.|..:||:..:|:..|:|:|
  Rat   520 GPYPFGIDPIWNIATNKLTFLNSFKMKMSVILGIIHMLFGVSLSLFNHIYFKKPLNIYFGFIPEI 584

  Fly   569 LFLLLLFGYMVFMMFFKWFSYNARTSFQPETPGCAPSVLIMFINMMLFKNTEPPKGCNEFMFESQ 633
            :|:..||||:|.::|:||.:|:|.:|..      |||:||.||||.||..   |:..|..::..|
  Rat   585 IFMSSLFGYLVILIFYKWTAYDAHSSRN------APSLLIHFINMFLFSY---PESGNAMLYSGQ 640

  Fly   634 PQLQKAFVLIALCCIPWMLLGKPLYIKFTRKNKAHANHNGQLTGNIELAEGE------TPLP--- 689
            ..:|...:::|:.|:|||||.|||.::.....|.|             .||:      ||.|   
  Rat   641 KGIQCFLIVVAMLCVPWMLLFKPLILRHQYLRKKH-------------LEGQPVEAPVTPAPSQQ 692

  Fly   690 --------TG---FSG-------NEENAG-------GAHGHD-DEPM-SEIY------IHQAIHT 721
                    ||   |.|       .||:|.       ..|..| :||. .|::      :||||||
  Rat   693 GLEAAPAATGTLNFGGIRVGNGPTEEDAEIIQHDQLSTHSEDAEEPTEDEVFDFGDTMVHQAIHT 757

  Fly   722 IEYVLSTISHTASYLRLWALSLAHAQLSEVLWQMVLSLGLKMSGVGGAIGLFIIFGAWCLFTLAI 786
            |||.|..||:||||||||||||||||||||||.||:.:||.:..:.|.:|||.||.|:...|:||
  Rat   758 IEYCLGCISNTASYLRLWALSLAHAQLSEVLWTMVIHIGLHVRSLAGGLGLFFIFAAFATLTVAI 822

  Fly   787 LVLMEGLSAFLHTLRLHWVEFMSKFYEGMGYAFQPFSFKAILDGEEEE 834
            |::|||||||||.||||||||.:|||.|.|:.|.||||:.|.:|:.:|
  Rat   823 LLIMEGLSAFLHALRLHWVEFQNKFYTGTGFKFLPFSFEHIREGKFDE 870

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha100-2NP_650722.1 V_ATPase_I 28..824 CDD:279793 436/854 (51%)
NtpI 35..825 CDD:224188 432/848 (51%)
Atp6v0a1XP_017452683.1 V_ATPase_I 27..860 CDD:396194 437/855 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342352
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1269
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53812
OrthoDB 1 1.010 - - D164762at33208
OrthoFinder 1 1.000 - - FOG0000328
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100301
Panther 1 1.100 - - O PTHR11629
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X226
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.760

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