DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha100-2 and Tcirg1

DIOPT Version :9

Sequence 1:NP_650722.1 Gene:Vha100-2 / 42216 FlyBaseID:FBgn0028670 Length:834 Species:Drosophila melanogaster
Sequence 2:NP_001129563.1 Gene:Tcirg1 / 27060 MGIID:1350931 Length:834 Species:Mus musculus


Alignment Length:859 Identity:361/859 - (42%)
Similarity:516/859 - (60%) Gaps:65/859 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGDMFRSEEMALCQMFIQPEAAYTSVSELGETGCVQFRDLNVNVNAFQRKFVTEVRRCDELERKI 65
            ||.||||||:||.|:.:...:||..||:|||.|.|:|||||.:|:||||:||.:||||:|||:..
Mouse     1 MGSMFRSEEVALVQLLLPTGSAYNCVSQLGELGLVEFRDLNESVSAFQRRFVVDVRRCEELEKTF 65

  Fly    66 RYIETEIKKDGIVLPDIQDDIPRAPNPREIIDLEAHLEKTESEMIELAQNEVNMKSNYLELTELR 130
            .::..|:::.|:.|...:..:| ||.||:::.::...::...|:.::..|:..:::...:|....
Mouse    66 TFLREEVQRAGLTLAPPEGTLP-APPPRDLLRIQEETDRLAQELRDVRGNQQALRAQLHQLRLHS 129

  Fly   131 KVL----------ENTQGFFSDQEVLNLDSSNRAGGDNDAAAQHRGRLGFVAGVINRERVFAFER 185
            .||          ::|:|.||:...|   .....|..:|.      ::.||||.:...:..|.||
Mouse   130 AVLGQSHSPPVAADHTEGPFSETTPL---LPGTRGPHSDL------KVNFVAGAVEPYKAAALER 185

  Fly   186 MLWRISRGNVFLKRSDLDEPLNDPATGHPIYKTVFVAFFQGEQLKNRIKKVCTGFHASLYPCPSS 250
            :|||..||.:.....:.:..|.||.||.|.....||..:.|||:..:|:|:...||..::|....
Mouse   186 LLWRACRGFLIASFRETEGQLEDPVTGEPATWMTFVISYWGEQIGQKIRKITDCFHCHVFPYLEQ 250

  Fly   251 HNEREEMVRNVRTRLEDLKLVLSQTEDHRSRVLATVSKNLPSWSIMVKKMKAIYHTLNLFNMDVT 315
            ...|...::.::.:.::|:.||.:|:...|:||..|.:.||.|.:.:.||||:|.|||..:::.|
Mouse   251 EEARFRTLQQLQQQSQELQEVLGETDRFLSQVLGRVQQLLPPWQVQIHKMKAVYLTLNQCSVNTT 315

  Fly   316 KKCLIGECWVPTNDLPVVQKALSDGSAAVGSTIPSFLNVIDTNEQPPTFNRTNKFTRGFQNLIDA 380
            .||||.|.|....|||.||:||..||:..|  :.:..:.|...:.|||..|||:||..||.::||
Mouse   316 HKCLIAEVWCAARDLPTVQQALQSGSSEEG--VSAVAHRIPCQDMPPTLIRTNRFTSSFQGIVDA 378

  Fly   381 YGVASYRECNPALYTCITFPFLFAVMFGDLGHGLILVLFGAWMVLCERKLARIRNGGEIWNIFFG 445
            |||..|||.|||.||.|||||||||||||:||||::.||...|||.|.:.|......|||..|||
Mouse   379 YGVGRYREVNPAPYTIITFPFLFAVMFGDVGHGLLMFLFALAMVLTENRPAVKAAQNEIWQTFFG 443

  Fly   446 GRYIILLMGLFAMYTGLVYNDVFSKSMNLFGSRWFNNYNTTTVLTNPN------------LQLPP 498
            |||::||||||::|||.:||:.||::..:|.|.|     :...:.|.:            |.|.|
Mouse   444 GRYLLLLMGLFSVYTGFIYNECFSRATTIFPSGW-----SVAAMANQSGWSDEYLSQHSMLTLNP 503

  Fly   499 NSSAV--GVYPFGMDPVWQLADNKIIFLNSFKMKLSIIFGVLHMVFGVCMSVVNFTHFKRYASIF 561
            |.:.|  |.||||:||:|.||.|.:.||||||||:|:|.||.||.|||.:|:.|..||.:...:.
Mouse   504 NITGVFLGPYPFGIDPIWSLATNHLSFLNSFKMKMSVILGVTHMAFGVFLSIFNHVHFGQAHRLL 568

  Fly   562 LEFVPQILFLLLLFGYMVFMMFFKWFSYNARTSFQPETPGCAPSVLIMFINMMLFKNTEPPKGCN 626
            ||.:|:::|||.||||:||::.:||.:.:|.::      ..|||:||.||||.||....    .|
Mouse   569 LETLPELIFLLGLFGYLVFLIVYKWVNVSAASA------SSAPSILIHFINMFLFSQNP----TN 623

  Fly   627 EFMFESQPQLQKAFVLIALCCIPWMLLGKPLYIKFTRKNKAH-----ANHNGQLTGNIELAEGET 686
            ..:|..|..:|...|::||..:|.:|||.|||:....:::.:     |....:.|..:..:...:
Mouse   624 HLLFHGQEVVQYVLVVLALATVPILLLGTPLYLLRQHRHRRNTQRRPAGQQDEDTDKLLASPDAS 688

  Fly   687 PLPTGFSGNEENAGGAHGHDDEPM-SEIYIHQAIHTIEYVLSTISHTASYLRLWALSLAHAQLSE 750
            .|...:|.:||.||.....:.|.: |||::||||||||:.|..||:|||||||||||||||||||
Mouse   689 TLENSWSPDEEKAGSPGDEETEFVPSEIFMHQAIHTIEFCLGCISNTASYLRLWALSLAHAQLSE 753

  Fly   751 VLWQMVLSLGLKMSGVGGAIG-----LFIIFGAWCLFTLAILVLMEGLSAFLHTLRLHWVEFMSK 810
            |||.||:.:||   |:|..||     |..:|.|:.:.|:|||::|||||||||.||||||||.:|
Mouse   754 VLWAMVMRIGL---GMGREIGVAAVVLVPVFAAFAVLTVAILLVMEGLSAFLHALRLHWVEFQNK 815

  Fly   811 FYEGMGYAFQPFSF 824
            ||.|.||...||:|
Mouse   816 FYSGTGYKLSPFTF 829

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha100-2NP_650722.1 V_ATPase_I 28..824 CDD:279793 345/830 (42%)
NtpI 35..825 CDD:224188 342/825 (41%)
Tcirg1NP_001129563.1 NtpI 27..829 CDD:224188 346/831 (42%)
V_ATPase_I 28..829 CDD:279793 345/830 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1269
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53812
OrthoDB 1 1.010 - - D164762at33208
OrthoFinder 1 1.000 - - FOG0000328
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100301
Panther 1 1.100 - - O PTHR11629
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X226
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.830

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