DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha100-2 and vha-7

DIOPT Version :9

Sequence 1:NP_650722.1 Gene:Vha100-2 / 42216 FlyBaseID:FBgn0028670 Length:834 Species:Drosophila melanogaster
Sequence 2:NP_001379486.1 Gene:vha-7 / 178219 WormBaseID:WBGene00006916 Length:1210 Species:Caenorhabditis elegans


Alignment Length:915 Identity:369/915 - (40%)
Similarity:521/915 - (56%) Gaps:102/915 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 MFRSEEMALCQMFIQPEAAYTSVSELGETGCVQFRDLNVNVNAFQRKFVTEVRRCDELERKIRYI 68
            ||||:.|.|.||.:..|||:..|:|:|:.|.|||.|||..::.:.|.||.::|||:|:|||:|::
 Worm   292 MFRSDPMKLYQMILVKEAAFECVAEIGKHGNVQFVDLNAKMSLYSRTFVKQMRRCEEMERKLRFL 356

  Fly    69 ETEI--KKDGIVLPDIQDDIPRAPNPREIIDLEAHLEKTESEMIELAQNEVNMKSNYLELTELRK 131
            |.::  .|.|:....|......||...|:|.||..|::.|.|.::|..|:..::.|.....|..:
 Worm   357 EKQVITCKPGLDPKSIDYTDLSAPTQAEMIQLEHKLDQLEREFLDLNNNDYALRKNLNSSKEFLQ 421

  Fly   132 VLENTQGFF------------------SDQEVLN-------LDSSNR------AGGDNDAAAQHR 165
            |:.....||                  .|.|:.:       |.|||.      .|.|::|     
 Worm   422 VMRLVDEFFQVHKEEEAKARFERSATTDDIEMFSKSFGFGGLPSSNEMPLTPLLGSDDNA----- 481

  Fly   166 GRLGFVAGVINRERVFAFERMLWRISRGNVFLKRSDLDEPLNDPATGHPIYKTVFVAFFQGEQLK 230
               .|||||:..::..:|||:|||..|...|::.||....:|||.|..|:.|.||:.||:||.|:
 Worm   482 ---WFVAGVLPLDKKESFERVLWRACRRTAFVRTSDASFTVNDPVTLEPLQKCVFIVFFKGESLR 543

  Fly   231 NRIKKVCTGFHASLYPCPSSHNEREEMVRNVRTRLEDLKLVLSQTEDHRSRVLATVSKNLPSWSI 295
            ..::|||.||:|:.||||.|..:|:..:.....|:.||.:|:..|:.||..:|..:|..:|.|..
 Worm   544 LIVEKVCDGFNATQYPCPKSSKDRKMKMSETEGRMNDLTVVIDTTQTHRYTILKDMSFEIPIWLK 608

  Fly   296 MVKKMKAIYHTLNLFNMDVTKKCLIGECWVPTNDLPVVQKALSDGSAAVGSTIPSFLNVIDTNEQ 360
            .::..|:::..:|:|.:| |...|.||||:|..:...|::||.||..|.|:.:...||.:.||..
 Worm   609 NIQIQKSVFAVMNMFTVD-TNGFLAGECWIPAAEEDDVRQALHDGFKASGTEVEPILNELWTNAP 672

  Fly   361 PPTFNRTNKFTRGFQNLIDAYGVASYRECNPALYTCITFPFLFAVMFGDLGHGLILVLFGAWMVL 425
            ||||:||||||..||:::|:|||:.|.|.|||.||.|||||||||||||..||.||:|...:.:.
 Worm   673 PPTFHRTNKFTNVFQSIVDSYGVSQYCEVNPAPYTIITFPFLFAVMFGDAAHGAILLLAALFFIR 737

  Fly   426 CERKLARIRNGGEIWNIFFGGRYIILLMGLFAMYTGLVYNDVFSKSMNLFGSRWFNNYNTTTV-- 488
            .|||:...:...||:|.|:|||||::|||:|::|||.:|||.|:||.|:|||.|.|:||.|.:  
 Worm   738 NERKIESKKIRDEIFNTFYGGRYIMMLMGIFSIYTGFLYNDAFAKSFNVFGSGWSNSYNETQLDW 802

  Fly   489 --------LTNPNLQLPPNSS--AVGVYPFGMDPVWQLADNKIIFLNSFKMKLSIIFGVLHMVFG 543
                    ....:|:|.|..|  ....||||:||:|.:|||::.||||.|||.|:|.|:..|.||
 Worm   803 WIARSYRKHREYSLELVPEKSFDIEKTYPFGVDPIWNIADNRLSFLNSMKMKASVIIGITQMTFG 867

  Fly   544 VCMSVVNFTHFKRYASIFLEFVPQILFLLLLFGYMVFMMFFKW--FSYNARTSFQPETPG--CAP 604
            |.:||:|..|||.|..|...|:||::||..:|.|:...:..||  ||.||...|..|.||  |||
 Worm   868 VFLSVLNHIHFKSYIDIISNFIPQVIFLSCIFIYLCIQIIVKWIFFSVNAENVFGFEYPGSHCAP 932

  Fly   605 SVLIMFINMMLFK---------NTEPPKGCN-EFMFESQPQLQKAFVLIALCCIPWMLLGKPLYI 659
            |:||..|||.:||         |.|....|: .:.:.:|..::...:.|:|.|||.||.||||::
 Worm   933 SLLIGLINMFMFKKRNEGYLNENGEVYSNCHLGYWYPNQRLVETILISISLACIPIMLFGKPLWV 997

  Fly   660 KFTRKNKAHANHNGQL----TGNIELAEGETPL----PTGFS------GNEENAGGAHGHDDEPM 710
            :|....:.....|..|    .....::...:|:    |..|.      .:|.:.|....|.   :
 Worm   998 RFVTSKRHKLQENKSLKSLRRNGTTVSAPTSPVVDAGPPRFEDAELLLADELDIGEDIHHS---L 1059

  Fly   711 SEIYIHQAIHTIEYVLSTISHTASYLRLWALSLAHAQLSEVLWQMVLSLGLK------------- 762
            |:|::||||||||:||..:||||||||||||||||||||||:|.|||..|:.             
 Worm  1060 SDIFVHQAIHTIEFVLGCVSHTASYLRLWALSLAHAQLSEVMWHMVLIQGIHTVDHIENETIAMC 1124

  Fly   763 MSGVGGAIGLFIIFGAWCLFTLAILVLMEGLSAFLHTLRLHWVEFMSKFYEGMGYAFQPFSFKAI 827
            :..|...:..||    :...:|:||::|||||||||.||||||||.||||.|.|:.|..|..|..
 Worm  1125 LKPVVACVAFFI----FASLSLSILIMMEGLSAFLHALRLHWVEFQSKFYLGTGHPFHAFYLKES 1185

  Fly   828 LDGEE 832
            |:..:
 Worm  1186 LENAQ 1190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha100-2NP_650722.1 V_ATPase_I 28..824 CDD:279793 355/881 (40%)
NtpI 35..825 CDD:224188 352/875 (40%)
vha-7NP_001379486.1 V_ATPase_I 315..1181 CDD:396194 354/881 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53812
OrthoDB 1 1.010 - - D164762at33208
OrthoFinder 1 1.000 - - FOG0000328
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100301
Panther 1 1.100 - - O PTHR11629
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X226
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.930

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