DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha100-2 and vha-5

DIOPT Version :9

Sequence 1:NP_650722.1 Gene:Vha100-2 / 42216 FlyBaseID:FBgn0028670 Length:834 Species:Drosophila melanogaster
Sequence 2:NP_501399.1 Gene:vha-5 / 177626 WormBaseID:WBGene00006914 Length:873 Species:Caenorhabditis elegans


Alignment Length:882 Identity:385/882 - (43%)
Similarity:548/882 - (62%) Gaps:61/882 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGDMFRSEEMALCQMFIQPEAAYTSVSELGETGCVQFRDLNVNVNAFQRKFVTEVRRCDELERKI 65
            ||.:.|||||..||:.::.:||:..|:|:|:...|||:|||.|||:|||.||.::||.||:|||:
 Worm     1 MGSLSRSEEMRFCQLIVEKDAAFNIVAEIGKQPYVQFKDLNPNVNSFQRTFVKDIRRYDEMERKL 65

  Fly    66 RYIETEIKKDGIVLPDIQD--DIPRAPNPREIIDLEAHLEKTESEMIELAQNEVNMKSNYLELTE 128
            |::|::|.||.||:|...|  |....|. .|:..||..|.:.|.::..:..::..:|:|:::|.|
 Worm    66 RFLESQIVKDEIVIPGRVDTGDYTILPT-SELNTLEGTLTELEKDVKSMNDSDSQLKANFMDLKE 129

  Fly   129 LRKVLENTQGFF-------SDQEVLNLDSSNRAGGDNDAAAQHRGRLGFVAGVINRERVFAFERM 186
            ...||:.|..||       :.:|:.|||.      :.......:|.:.::.|:|.|||:..|||:
 Worm   130 WDAVLDKTDEFFQGGVDDQAQEELENLDE------EGAVPRVEKGPVNYLVGIIRRERLNGFERV 188

  Fly   187 LWRISRGNVFLKRSDLDEPLNDPATGHPIYKTVFVAFFQGEQLKNRIKKVCTGFHASLYP-CPSS 250
            |||......:::.||::|.|.||.||..::|:||:.|.:|:::::.::|||.||.|.|:. ||.:
 Worm   189 LWRACHHTAYIRSSDIEEELEDPGTGEKVHKSVFIIFLKGDRMRSIVEKVCDGFKAKLFKNCPKT 253

  Fly   251 HNEREEMVRNVRTRLEDLKLVLSQTEDHRSRVLATVSKNLPSWSIMVKKMKAIYHTLNLFNMDVT 315
            ..||:....:||.|::||:.||.||.:||.|||...:.|...|...|:.:|.::|.||||..|..
 Worm   254 FKERQSARNDVRARIQDLQTVLGQTREHRFRVLQAAANNHHQWLKQVRMIKTVFHMLNLFTFDGI 318

  Fly   316 KKCLIGECWVPTNDLPVVQKALSDGSAAVGSTIPSFLNVIDTNEQPPTFNRTNKFTRGFQNLIDA 380
            .:..:||||:|...:..|:||:..|:...||::...||:::|:..|||:|.|||||..||.::|:
 Worm   319 GRFFVGECWIPLKHVEDVRKAIEVGAERSGSSVKPVLNILETSVTPPTYNETNKFTAVFQGIVDS 383

  Fly   381 YGVASYRECNPALYTCITFPFLFAVMFGDLGHGLILVLFGAWMVLCERKLARIRNGGEIWNIFFG 445
            ||:|:|||.|||.||.|||||||:.||||||||.|:::.|.|.||.|:.|.......||:|:|||
 Worm   384 YGIATYRELNPAPYTIITFPFLFSCMFGDLGHGCIMLMAGLWFVLREKNLQARNIKDEIFNMFFG 448

  Fly   446 GRYIILLMGLFAMYTGLVYNDVFSKSMNLFGSRWFNNYNTTTVLTNPN---------LQLPPNSS 501
            |||||||||||:::.|::|||:|:||.|:|||.|.|.||.:.:....|         ::|.|..:
 Worm   449 GRYIILLMGLFSIHAGIIYNDMFAKSFNIFGSGWKNPYNASEIEGWINRTEHGKEMLVELAPEDA 513

  Fly   502 ---AVGVYPFGMDPVWQLADNKIIFLNSFKMKLSIIFGVLHMVFGVCMSVVNFTHFKRYASIFLE 563
               |.|.|.||:||:|.:|:||:.||||.|||||:|.|:..|.|||.:|..|.|:.|....||..
 Worm   514 YDHAGGPYSFGVDPIWNIAENKLNFLNSMKMKLSVILGISQMTFGVILSFFNHTYNKSKIDIFTV 578

  Fly   564 FVPQILFLLLLFGYMVFMMFFKW--FSYNARTSFQPETPG--CAPSVLIMFINMMLFKN------ 618
            |:||:||:..:|.|:...:..||  |.....|.|....||  ||||:||..|||.:.|:      
 Worm   579 FIPQMLFMGCIFMYLCLQIILKWLFFWTKEATVFGQIYPGSHCAPSLLIGLINMFMMKDRNAGFV 643

  Fly   619 TEPPKGCNEF----------MFESQPQLQKAFVLIALCCIPWMLLGKPLYIKFTRKNKAHANH-N 672
            .:..|...|:          .:..|..::...|:||:.|:|.||.|||::....:|.||...| |
 Worm   644 VDGGKVNGEYREVETCYLSQWYPGQSVIEMILVVIAVICVPVMLFGKPIHHVMQQKKKAKELHGN 708

  Fly   673 GQLTGNIELAEGETPLPTGFSGNEENAGGAH------GHDDEPMSEIYIHQAIHTIEYVLSTISH 731
            ..:..|:.....|..|    :|..:..|.||      ||:||...:|.:|||||||||||..:||
 Worm   709 ATVRANVVSDSSEIVL----NGGSKKEGAAHEEHGHGGHEDESFGDIMVHQAIHTIEYVLGCVSH 769

  Fly   732 TASYLRLWALSLAHAQLSEVLWQMV-LSLGLKMSGVGGAIGLFIIFGAWCLFTLAILVLMEGLSA 795
            ||||||||||||||||||||||.|| ::.||.:||..|.|.::::|..:.:.|::||||||||||
 Worm   770 TASYLRLWALSLAHAQLSEVLWHMVFVTGGLGISGTAGFIAVYVVFFIFFVLTISILVLMEGLSA 834

  Fly   796 FLHTLRLHWVEFMSKFYEGMGYAFQPFSFKAILDGEE 832
            ||||||||||||.||||.|:||.|.|:|||..|...|
 Worm   835 FLHTLRLHWVEFQSKFYLGLGYPFVPYSFKTALQEAE 871

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha100-2NP_650722.1 V_ATPase_I 28..824 CDD:279793 368/845 (44%)
NtpI 35..825 CDD:224188 367/839 (44%)
vha-5NP_501399.1 V_ATPase_I 28..863 CDD:279793 368/845 (44%)
NtpI 35..864 CDD:224188 367/839 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1269
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S598
OMA 1 1.010 - - QHG53812
OrthoDB 1 1.010 - - D164762at33208
OrthoFinder 1 1.000 - - FOG0000328
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100301
Panther 1 1.100 - - O PTHR11629
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X226
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.780

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