DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Vha100-2 and vha-6

DIOPT Version :9

Sequence 1:NP_650722.1 Gene:Vha100-2 / 42216 FlyBaseID:FBgn0028670 Length:834 Species:Drosophila melanogaster
Sequence 2:NP_496436.1 Gene:vha-6 / 174743 WormBaseID:WBGene00006915 Length:865 Species:Caenorhabditis elegans


Alignment Length:894 Identity:381/894 - (42%)
Similarity:537/894 - (60%) Gaps:103/894 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGDMFRSEEMALCQMFIQPEAAYTSVSELGETGCVQFRDLNVNVNAFQRKFVTEVRRCDELERKI 65
            ||.::|||.|.|||:|.|.|:||..|:||||.|..||.|||...||:.||||.|||||||:||||
 Worm     1 MGSIYRSEHMKLCQIFFQSESAYQCVAELGELGMAQFIDLNEEQNAYTRKFVNEVRRCDEMERKI 65

  Fly    66 RYIETEIKKDGIVLPDIQDDIPRAPNPREIIDLEAHLEKTESEMIELAQNEVNMKSNYLELTELR 130
            .::|.||.||.:.:||..:.|| ||.|:.:.::||:|||.|.|::::.:|...:|:|:::|.|::
 Worm    66 NFVEDEITKDLVPIPDYDEHIP-APQPKHMGEMEANLEKLEEELVQINKNCKVLKNNHVQLLEMK 129

  Fly   131 KVLENTQGFF---SDQEVLNLDSSNRAGGDN-----------DAAAQHRGRLGFVAGVINRERVF 181
            .|||:.....   |.:|.. :..|..|.|:.           |...:....|.||.||:.|.:..
 Worm   130 AVLEHVTSLLDPHSKREAA-MSISEAARGEAGPISFGMKDEFDKPVKDEKELKFVTGVVKRSKAI 193

  Fly   182 AFERMLWRISRGNVFLKRSDLDE-------PLNDPATGHPIYKTVFVAFFQGEQLKNRIKKVCTG 239
            ||||.|||:||..||.|...:.|       ...|        |.||:.||.||||:.::||:|.|
 Worm   194 AFERFLWRLSRAKVFAKFIQIQEQTELFSNEFED--------KCVFILFFSGEQLRAKVKKICDG 250

  Fly   240 FHASLYPCPSSHNEREEMVRNVRTRLEDLKLVLSQTEDHRSRVLATVSKNLPSWSIMVKKMKAIY 304
            |.|..|..|.:..||.:::.|::.:..|:|.|:.:|.|:||:.:...:.||..|.||:.|:|:|:
 Worm   251 FQAKCYTVPENPAERTKLLLNIKVQTTDMKAVIEKTLDYRSKCIHAAATNLRKWGIMLLKLKSIF 315

  Fly   305 HTLNLFNMDVTKKCLIGECWVPTNDLPVVQKALSDGSAAVGSTIPSFLNVIDTNEQPPTFNRTNK 369
            ||||:|::|||:||||.|||||..|:..|:.:|..|:...|||:|:.||.::|::.|||:.:.||
 Worm   316 HTLNMFSVDVTQKCLIAECWVPEADIGQVKNSLHMGTIHSGSTVPAILNEMETDKYPPTYFKLNK 380

  Fly   370 FTRGFQNLIDAYGVASYRECNPALYTCITFPFLFAVMFGDLGHGLILVLFGAWMVLCERKLARIR 434
            ||:||||::||||:|:|||.|||.:|.|:|||||||||||.|||:|:::..:..|:.|:||..::
 Worm   381 FTQGFQNIVDAYGIANYREVNPAPWTIISFPFLFAVMFGDAGHGIIMLIAASAFVIFEKKLISMK 445

  Fly   435 NGGEIWNIFFGGRYIILLMGLFAMYTGLVYNDVFSKSMNLFGSRWFNNYNTTTVL---------- 489
            ...||:|.||||||::||||:||:|||.:|||.:|||:|:|||.|.|.||.|.:.          
 Worm   446 IKDEIFNTFFGGRYVVLLMGMFAIYTGFIYNDFYSKSVNIFGSSWVNPYNQTLLANMDAQGADSN 510

  Fly   490 TNPNLQLPPN---SSAVGVYPFGMDPVWQLADNKIIFLNSFKMKLSIIFGVLHMVFGVCMSVVNF 551
            |:.:|..||.   :...|.||||:||||.||.|::.|||..|||.||:.|:..|.||:.:|::|.
 Worm   511 TDLSLTFPPEIAFNHDYGPYPFGVDPVWNLAINRLNFLNPMKMKTSILLGISQMAFGIMLSLMNH 575

  Fly   552 THFKRYASIFLEFVPQILFLLLLFGYMVFMMFFKWFSYNARTS--FQPETPG--CAPSVLIMFIN 612
            ...:....|...|:||.|||..:|.|:...:..||..:..:.:  |....||  ||||:||..||
 Worm   576 IGNRSVVDIVFVFIPQCLFLGCIFVYLCLQVLMKWIFFYVKPAYIFGRLYPGSNCAPSLLIGLIN 640

  Fly   613 MMLFKNTEPP----------------KGCN-----------EFMFESQPQLQKAFVLIALCCIPW 650
            |.:.|:.:..                .|.|           :..:.:|..::...:|||:..:|.
 Worm   641 MFMVKSRDASFAHDVGTAAGKEWVIVNGQNVTYTINDQCYLQQWYPNQSLVELILLLIAVVSVPV 705

  Fly   651 MLLGKPLYIKFTRKNKAHANHNGQLTGNIELAEGETPLPTGFSGNEENAGGAHGHDDEPMSEIYI 715
            |||.||.||::......|          |:|..|...                 |.:....:|.:
 Worm   706 MLLVKPFYIRWRHSRGLH----------IDLGHGPDE-----------------HGEFNFGDIMV 743

  Fly   716 HQAIHTIEYVLSTISHTASYLRLWALSLAHAQLSEVLWQMVLSLGLKMSGVGGAIGLFIIF-GAW 779
            ||||||||:||..:||||||||||||||||||||:|||.|||.:.|.|.|.||:..:.|:| ..:
 Worm   744 HQAIHTIEFVLGCVSHTASYLRLWALSLAHAQLSDVLWTMVLRMSLTMGGWGGSAAITILFYFIF 808

  Fly   780 CLFTLAILVLMEGLSAFLHTLRLHWVEFMSKFYEGMGYAFQPFSFKAIL 828
            .:.::.||:||||||||||.:|||||||.||||.|.|..|:||.|..|:
 Worm   809 SILSVCILILMEGLSAFLHAIRLHWVEFQSKFYGGTGIQFEPFCFTKII 857

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha100-2NP_650722.1 V_ATPase_I 28..824 CDD:279793 364/861 (42%)
NtpI 35..825 CDD:224188 359/855 (42%)
vha-6NP_496436.1 NtpI 28..858 CDD:224188 366/867 (42%)
V_ATPase_I 28..853 CDD:279793 364/861 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1269
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53812
OrthoDB 1 1.010 - - D164762at33208
OrthoFinder 1 1.000 - - FOG0000328
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100301
Panther 1 1.100 - - O PTHR11629
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X226
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.830

Return to query results.
Submit another query.