DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha100-2 and atp6v0a4

DIOPT Version :9

Sequence 1:NP_650722.1 Gene:Vha100-2 / 42216 FlyBaseID:FBgn0028670 Length:834 Species:Drosophila melanogaster
Sequence 2:NP_001107162.1 Gene:atp6v0a4 / 100135019 XenbaseID:XB-GENE-493197 Length:846 Species:Xenopus tropicalis


Alignment Length:876 Identity:439/876 - (50%)
Similarity:582/876 - (66%) Gaps:72/876 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGDMFRSEEMALCQMFIQPEAAYTSVSELGETGCVQFRDLNVNVNAFQRKFVTEVRRCDELERKI 65
            |..:||||||:|.|:.:|.||.|..::||||.|.|||||||.:||:|||:||.|||||:.:||.:
 Frog     1 MASLFRSEEMSLTQLILQVEAGYCCIAELGELGLVQFRDLNASVNSFQRRFVNEVRRCENMERIL 65

  Fly    66 RYIETEIKKDGIVLPDIQDDIPRAPNPREIIDLEAHLEKTESEMIELAQNEVNMKSNYLELTELR 130
            |::|:|:..|.|.: ...:.:|:.|.|||:||||..|||.|.|:.|:.:|:..:|.|:||||||:
 Frog    66 RFLESEMVNDKIKI-RTPEKLPQTPLPREMIDLETVLEKLEGELQEVNRNQQALKQNFLELTELK 129

  Fly   131 KVLENTQGFFSDQ-----EVLNLDSSNRAGGDNDAAAQHRGRLGFVAGVINRERVFAFERMLWRI 190
            .:|:.||.||..:     :..:.|:|:........:|...|:|||.||||||||:..|||:|||:
 Frog   130 HLLKKTQDFFEAEANLPDDFFSEDTSSLLELRTIPSAAAAGKLGFTAGVINRERMATFERLLWRV 194

  Fly   191 SRGNVFLKRSDLDEPLNDPATGHPIYKTVFVAFFQGEQLKNRIKKVCTGFHASLYPCPSSHNERE 255
            .|||::||.::||..|.||.|...:.|.||:.|:||:|||.:|||:|.||.|::||||.|..||:
 Frog   195 CRGNIYLKYTELDTALEDPVTKEEVKKNVFIIFYQGDQLKLKIKKICDGFKATVYPCPESATERK 259

  Fly   256 EMVRNVRTRLEDLKLVLSQTEDHRSRVLATVSKNLPSWSIMVKKMKAIYHTLNLFNMDVTKKCLI 320
            |||.:|.||:|||..|::|||.||.|||...:::|.||.|.||||||:||.|||.|:|||::|:|
 Frog   260 EMVADVNTRIEDLNTVITQTESHRQRVLLEAAQSLCSWGIKVKKMKAVYHVLNLCNIDVTQQCVI 324

  Fly   321 GECWVPTNDLPVVQKALSDGSAAVGSTIPSFLNVIDTNEQPPTFNRTNKFTRGFQNLIDAYGVAS 385
            .|.|.|..|...:::||..|....||||...|..|.:...|||||||||||.||||:::||||.|
 Frog   325 AEIWCPIADKEQIKQALHRGMERSGSTIAPILTNISSKLDPPTFNRTNKFTSGFQNIVNAYGVGS 389

  Fly   386 YRECNPALYTCITFPFLFAVMFGDLGHGLILVLFGAWMVLCERKLARIRNGGEIWNIFFGGRYII 450
            |||.||..||.|||||||||||||.|||.:::.|..||||.|::|...:...||||.||||||:|
 Frog   390 YREMNPTPYTIITFPFLFAVMFGDCGHGSVMLGFALWMVLNEKQLLASKTDNEIWNTFFGGRYLI 454

  Fly   451 LLMGLFAMYTGLVYNDVFSKSMNLFGSRW-----FNNYNTTTVLTNPNLQLPPNSSAVGV----- 505
            |||.:|::|||.:|||.||||.::|||.|     |.|......|.:..|||..:.:..||     
 Frog   455 LLMSIFSIYTGFIYNDCFSKSFDIFGSSWRVRPMFINKTWNDNLVHQGLQLQLDPAVPGVYSGNP 519

  Fly   506 YPFGMDPVWQLADNKIIFLNSFKMKLSIIFGVLHMVFGVCMSVVNFTHFKRYASIFLEFVPQILF 570
            ||||:||:|.:|.||:.||||:|||:|::.|:..|||||.:.::|..:|||..:|.|:|||:::|
 Frog   520 YPFGIDPIWNIAQNKLTFLNSYKMKMSVVMGITQMVFGVMLGLLNHINFKRPINIILQFVPEMIF 584

  Fly   571 LLLLFGYMVFMMFFKWFSYNARTSFQPETPGCAPSVLIMFINMMLFKNTEPPKGCNEFMFESQPQ 635
            ::.||||:|||:.|||..|:..:|     .| |||:||.||||.||..::|   .|..::|.|.:
 Frog   585 IICLFGYLVFMIIFKWCKYDVHSS-----QG-APSILIHFINMFLFNYSDP---TNAPLYEHQKE 640

  Fly   636 LQKAFVLIALCCIPWMLLGKPLYIK---------------------FTRKNKAHANHNGQLTGNI 679
            :|...|:.||..:|||||.||..::                     .|....|||||.       
 Frog   641 VQTFLVIFALIAVPWMLLIKPFVLRANHLKAQRMLQSSSGPEDHAELTDVENAHANHK------- 698

  Fly   680 ELAEGETPLPTGFSGNEENAGGAHG-----HDDE-PMSEIYIHQAIHTIEYVLSTISHTASYLRL 738
                         |..||:.||.||     |.:| ...:|::|||||||||.|..||:|||||||
 Frog   699 -------------SKKEEHGGGDHGGGHGEHGEEFDFGDIFVHQAIHTIEYCLGCISNTASYLRL 750

  Fly   739 WALSLAHAQLSEVLWQMVLSLGLKMSGVGGAIGLFIIFGAWCLFTLAILVLMEGLSAFLHTLRLH 803
            |||||||||||||||.||:..||.:.|.||.||:||||.|:.:.|:|||::|||||||||.||||
 Frog   751 WALSLAHAQLSEVLWTMVMHQGLSIGGYGGLIGVFIIFAAFAVLTVAILLVMEGLSAFLHALRLH 815

  Fly   804 WVEFMSKFYEGMGYAFQPFSFKAILDGEEEE 834
            ||||.:|||.|.|:.|.||||::||:|.:.|
 Frog   816 WVEFQNKFYAGTGHLFSPFSFQSILEGTDNE 846

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha100-2NP_650722.1 V_ATPase_I 28..824 CDD:279793 420/837 (50%)
NtpI 35..825 CDD:224188 416/831 (50%)
atp6v0a4NP_001107162.1 NtpI 26..838 CDD:224188 422/841 (50%)
V_ATPase_I 28..836 CDD:279793 420/837 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H39904
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D164762at33208
OrthoFinder 1 1.000 - - FOG0000328
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11629
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X226
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.110

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