DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha100-2 and atp6v0a1

DIOPT Version :9

Sequence 1:NP_650722.1 Gene:Vha100-2 / 42216 FlyBaseID:FBgn0028670 Length:834 Species:Drosophila melanogaster
Sequence 2:XP_031749790.1 Gene:atp6v0a1 / 100036694 XenbaseID:XB-GENE-959346 Length:871 Species:Xenopus tropicalis


Alignment Length:869 Identity:456/869 - (52%)
Similarity:606/869 - (69%) Gaps:59/869 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGDMFRSEEMALCQMFIQPEAAYTSVSELGETGCVQFRDLNVNVNAFQRKFVTEVRRCDELERKI 65
            ||::||||||.|.|:|:|.||||..||||||.|.|||||||.:||.||||||.|||||:|::||:
 Frog    27 MGELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRDLNPDVNVFQRKFVNEVRRCEEMDRKL 91

  Fly    66 RYIETEIKKDGIVLPDIQDDIPRAPNPREIIDLEAHLEKTESEMIELAQNEVNMKSNYLELTELR 130
            |::|.|:||..|.:.|..:: |..|.||::|||||:.||.|.|:.|:..|:..:|.|:||||||:
 Frog    92 RFVEKEVKKANISILDTGEN-PEVPFPRDMIDLEANFEKIEIELKEINTNQEALKRNFLELTELK 155

  Fly   131 KVLENTQGFFSD------QEVLNLDSSNRAGGDNDAAAQHRG---RLGFVAGVINRERVFAFERM 186
            .:|..||.||.:      |::.:.|....:....:.:...||   |||||||||||||:..||||
 Frog   156 FILRKTQQFFDEAQLHHHQQMADPDLLEESSSLLEPSEMGRGAPLRLGFVAGVINRERIPTFERM 220

  Fly   187 LWRISRGNVFLKRSDLDEPLNDPATGHPIYKTVFVAFFQGEQLKNRIKKVCTGFHASLYPCPSSH 251
            |||:.||||||::::::.||.||.||..::|:||:.||||:|||||:||:|.||.|||||||.:.
 Frog   221 LWRVCRGNVFLRQAEIENPLEDPVTGDSVHKSVFIIFFQGDQLKNRVKKICEGFRASLYPCPETP 285

  Fly   252 NEREEMVRNVRTRLEDLKLVLSQTEDHRSRVLATVSKNLPSWSIMVKKMKAIYHTLNLFNMDVTK 316
            .||:||...|.||:|||::||:||||||.|||...:|:|..|.|.|:|||||||||||.|:|||:
 Frog   286 QERKEMATGVNTRIEDLQMVLNQTEDHRQRVLQAAAKSLRVWFIKVRKMKAIYHTLNLCNIDVTQ 350

  Fly   317 KCLIGECWVPTNDLPVVQKALSDGSAAVGSTIPSFLNVIDTNEQPPTFNRTNKFTRGFQNLIDAY 381
            ||||.|.|.|..||..:|.||..|:...|||:||.||.:.||:.|||:|:|||||.|||||:|||
 Frog   351 KCLIAEVWCPVADLDSIQFALRRGTEHSGSTVPSILNRMQTNQTPPTYNKTNKFTYGFQNLVDAY 415

  Fly   382 GVASYRECNPALYTCITFPFLFAVMFGDLGHGLILVLFGAWMVLCERKLARIRNGGEIWNIFFGG 446
            |:.||||.|||.||.|||||||||||||.|||:::.||..|||:.|.::...:...|::.:.|.|
 Frog   416 GIGSYREINPAPYTIITFPFLFAVMFGDFGHGILMTLFAVWMVVRESRILSQKIDNELFTMMFSG 480

  Fly   447 RYIILLMGLFAMYTGLVYNDVFSKSMNLFGSRW-----FNNYNTTTVLTNPN-LQLPPNSSAV-- 503
            ||||||||||::||||:|||.|||::|||||.|     |.:..:..:|.:.: |||.||.:.|  
 Frog   481 RYIILLMGLFSIYTGLIYNDCFSKALNLFGSSWSVRPMFTDTWSEDLLKHTSVLQLNPNVTGVFN 545

  Fly   504 GVYPFGMDPVWQLADNKIIFLNSFKMKLSIIFGVLHMVFGVCMSVVNFTHFKRYASIFLEFVPQI 568
            |.||||:||:|.||.||:.||||||||:|::.|::||.|||.:|::|..:||:..:|:|.|:|::
 Frog   546 GPYPFGIDPIWSLATNKLTFLNSFKMKMSVVLGIIHMTFGVALSLLNHIYFKKPLNIYLGFIPEM 610

  Fly   569 LFLLLLFGYMVFMMFFKWFSYNARTSFQPETPGCAPSVLIMFINMMLF--KNTEPPKGCNEFMFE 631
            :|:..||||:|.::.:||.:|:|.||.      .|||:||.||||.||  ::|..|     .:::
 Frog   611 IFMTTLFGYLVILIIYKWCAYDASTSM------VAPSLLIHFINMFLFSYQDTSLP-----MLYK 664

  Fly   632 SQPQLQKAFVLIALCCIPWMLLGKPLYIKFTRKNKAH-ANHNGQLTGNIELAEGETPLPTGFSGN 695
            .|..||...|:.|:.|:||||:.|||.::.....:.| ..||   .|.|.:..|.|         
 Frog   665 GQMGLQCFLVVCAIICVPWMLVVKPLILRRQYLRRKHLGTHN---FGGIRVGNGPT--------- 717

  Fly   696 EENAG-------GAHGHD-DEP-MSEIY------IHQAIHTIEYVLSTISHTASYLRLWALSLAH 745
            ||:|.       ..|..: :|| |.|::      :|||||||||.|..||:||||||||||||||
 Frog   718 EEDAEIIQHDQLSMHSEEGEEPAMEEVFDFGDTVVHQAIHTIEYCLGCISNTASYLRLWALSLAH 782

  Fly   746 AQLSEVLWQMVLSLGLKMSGVGGAIGLFIIFGAWCLFTLAILVLMEGLSAFLHTLRLHWVEFMSK 810
            ||||||||.||:.:||.:..:||.|.|..:|.|:...|:|||::|||||||||.||||||||.:|
 Frog   783 AQLSEVLWTMVMHVGLSIRSLGGGIALVFVFSAFATLTIAILLIMEGLSAFLHALRLHWVEFQNK 847

  Fly   811 FYEGMGYAFQPFSFKAILDGEEEE 834
            ||.|.|:.|.||||:.|.:|:.:|
 Frog   848 FYMGTGFKFLPFSFENIREGKFDE 871

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha100-2NP_650722.1 V_ATPase_I 28..824 CDD:279793 433/830 (52%)
NtpI 35..825 CDD:224188 429/824 (52%)
atp6v0a1XP_031749790.1 V_ATPase_I 53..861 CDD:396194 434/831 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53812
OrthoDB 1 1.010 - - D164762at33208
OrthoFinder 1 1.000 - - FOG0000328
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11629
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X226
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.030

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