DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Vha100-2 and tcirg1a

DIOPT Version :9

Sequence 1:NP_650722.1 Gene:Vha100-2 / 42216 FlyBaseID:FBgn0028670 Length:834 Species:Drosophila melanogaster
Sequence 2:XP_005160329.1 Gene:tcirg1a / 100003139 ZFINID:ZDB-GENE-090311-31 Length:823 Species:Danio rerio


Alignment Length:852 Identity:382/852 - (44%)
Similarity:535/852 - (62%) Gaps:58/852 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGDMFRSEEMALCQMFIQPEAAYTSVSELGETGCVQFRDLNVNVNAFQRKFVTEVRRCDELERKI 65
            ||.:||||||.|.|:|:|..:||..||||||.|.|:|||||.||||||:|||:|||||:|||:..
Zfish     1 MGCLFRSEEMCLVQIFLQAGSAYNCVSELGELGLVEFRDLNPNVNAFQKKFVSEVRRCEELEKTF 65

  Fly    66 RYIETEIKKDGIVLPDIQ------DDIPRAPNPREIIDLEAHLEKTESEMIELAQNEVNMKSNYL 124
            :|:|.||.:.  :.|.::      ..||.||.|||::.:|...|:...|:.|:::|..::::...
Zfish    66 KYLEQEISRS--LYPPLKGALPTASPIPSAPQPRELLCIEEESERLARELREVSRNRDSLRNQLT 128

  Fly   125 ELTELRKVLENTQGFFSDQ-EVLNLDSSNRAGGDNDAAAQHRGRLGFVAGVINRERVFAFERMLW 188
            :|::.|.||:.:....:.| ..|.|::|.......|.      ||.|||||::..:|.||||:||
Zfish   129 QLSQYRGVLKQSILLPTSQVPPLTLETSALLDSRQDM------RLSFVAGVVHPWKVPAFERLLW 187

  Fly   189 RISRGNVFLKRSDLDEPLNDPATGHPIYKTVFVAFFQGEQLKNRIKKVCTGFHASLYPCPSSHNE 253
            |..||.:.:...:::|.|.:|.||..|..||||..|.|||:..::||:|..|....:..|....|
Zfish   188 RACRGYIIVDFWEMEERLEEPDTGETIQWTVFVISFWGEQIGQKVKKICDCFRTHTFVYPEGLEE 252

  Fly   254 REEMVRNVRTRLEDLKLVLSQTEDHRSRVLATVSKNLPSWSIMVKKMKAIYHTLNLFNMDVTKKC 318
            ||.:::.:.:|:.|::.||||||.:..::|:.....:|.|.|.|:|.||:...|||.:..||.||
Zfish   253 REGILQGLESRIVDIRTVLSQTEQYMQQLLSRCVCQMPQWKIRVQKCKAVQMVLNLCSPSVTDKC 317

  Fly   319 LIGECWVPTNDLPVVQKALSDGSAAVGSTIPSFLNVIDTNEQPPTFNRTNKFTRGFQNLIDAYGV 383
            ||.|.|.|...|.::|.||.:|:...||::.||.|.:.....|||...||.||..|||::|||||
Zfish   318 LIAEAWCPVAKLLLLQSALMEGTRKSGSSVDSFYNRLPAPTSPPTLFETNAFTSSFQNIVDAYGV 382

  Fly   384 ASYRECNPALYTCITFPFLFAVMFGDLGHGLILVLFGAWMVLCERKLARIRNGGEIWNIFFGGRY 448
            |||||.|||:||.|||||||||||||:||||::.|...||:|.||......:..|||.:.|||||
Zfish   383 ASYREVNPAVYTIITFPFLFAVMFGDVGHGLLMTLAALWMILEERDPKMRTSTNEIWRMLFGGRY 447

  Fly   449 IILLMGLFAMYTGLVYNDVFSKSMNLFGSRW-------FNNYNTTTVLTNPNLQLPPNSSAV--G 504
            :||:||||::|||.:||:.|||.::...|.|       ..|::..|:.:|..|.|.||.:.|  |
Zfish   448 LILMMGLFSIYTGAIYNECFSKGLSPVSSGWHLKPMIQHYNWSDETLRSNQYLTLDPNITGVFQG 512

  Fly   505 VYPFGMDPVWQLADNKIIFLNSFKMKLSIIFGVLHMVFGVCMSVVNFTHFKRYASIFLEFVPQIL 569
            .||||:||:|.||:|.:.||||:|||:|:|.||:||.||||:|..|:.:|...:|:||..:|:::
Zfish   513 PYPFGIDPIWSLANNHLTFLNSYKMKMSVIIGVIHMTFGVCLSFFNYMYFGNVSSVFLVLIPELV 577

  Fly   570 FLLLLFGYMVFMMFFKWFSYNARTSFQPETPGCAPSVLIMFINMMLFKN--TEPPKGCNEFMFES 632
            |:|.||||:|||:.|||.      :|.|:....|||:||.||:|.||..  :.||      ::..
Zfish   578 FMLCLFGYLVFMVVFKWI------AFGPQDSDRAPSILIHFIDMFLFSENPSNPP------LYPR 630

  Fly   633 QPQLQKAFVLIALCCIPWMLLGKPLYIKFTRKNKAHANHNGQ---LTG----NIELAEGETPLPT 690
            |..:|:..|.:||..:|.:||||||.:.|..:|.....|..|   :|.    |.:|.:.|     
Zfish   631 QMTVQRILVCLALLAVPVLLLGKPLQLYFQHRNSRRTLHEEQRSLVTDTSSINAQLVDLE----- 690

  Fly   691 GFSGNEENAGGAHGHDDEPMSEIYIHQAIHTIEYVLSTISHTASYLRLWALSLAHAQLSEVLWQM 755
                    .||.....:...:|:::.||||||||.|..||:|||||||||||||||||:||||.|
Zfish   691 --------GGGGIDEQEFEWTEVFMQQAIHTIEYCLGCISNTASYLRLWALSLAHAQLAEVLWVM 747

  Fly   756 VLSLGLKMSGVGGAIGLFIIFGAWCLFTLAILVLMEGLSAFLHTLRLHWVEFMSKFYEGMGYAFQ 820
            |:.:.|...|..|::.|.::|..:...|::||::|||||||||.||||||||.:|||.|.||.|.
Zfish   748 VMRISLSWQGYVGSVVLSVVFSLFATLTVSILLVMEGLSAFLHALRLHWVEFQNKFYRGSGYKFN 812

  Fly   821 PFSFKAI 827
            ||||::|
Zfish   813 PFSFESI 819

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha100-2NP_650722.1 V_ATPase_I 28..824 CDD:279793 363/820 (44%)
NtpI 35..825 CDD:224188 359/814 (44%)
tcirg1aXP_005160329.1 NtpI 5..818 CDD:224188 379/845 (45%)
V_ATPase_I 28..816 CDD:279793 363/820 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1269
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53812
OrthoDB 1 1.010 - - D164762at33208
OrthoFinder 1 1.000 - - FOG0000328
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100301
Panther 1 1.100 - - O PTHR11629
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X226
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.830

Return to query results.
Submit another query.