DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha100-4 and VHA-A1

DIOPT Version :10

Sequence 1:NP_650720.1 Gene:Vha100-4 / 42214 FlyBaseID:FBgn0038613 Length:844 Species:Drosophila melanogaster
Sequence 2:NP_850122.1 Gene:VHA-A1 / 817400 AraportID:AT2G28520 Length:817 Species:Arabidopsis thaliana


Alignment Length:855 Identity:317/855 - (37%)
Similarity:490/855 - (57%) Gaps:89/855 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 IFRSEVMSLVQMYLQPEAAYDTIAALGEVGCVQFRDLNAKINAQQRKFIGEVRRCDELERRIRYV 80
            :.|||.|:|||:.:..|:|:.:|..|||:|.:|||||||..:..||.|..:|:||.|:.|::|:.
plant    13 LMRSEKMTLVQLIIPVESAHRSITYLGELGLLQFRDLNADKSPFQRTFANQVKRCGEMSRKLRFF 77

  Fly    81 TAELNKEGHKV---LDLMDDFPPAPQPREIIDLELHLEKTETEILELAANNVNLQTSYLELSEMI 142
            ..:::|.|.:.   |::..|.       .:.|||..|...|.|:||:.:|:..|:.:|.||.|..
plant    78 KDQIDKAGLRCSPRLEIEPDI-------ALGDLERQLADHEHEVLEMNSNSEKLRQTYNELLEFK 135

  Fly   143 QVLERTDQFFSDQESH--------------NFDLNKMGTHRDPEKSNGH-----LGFVAGVISRE 188
            .|||:...|.....:|              |....:..:..:.|.:.||     |.|::|:|:::
plant   136 IVLEKASGFLVSSNTHAIGEEIELHESTYSNNGFIETASLLEQEMNPGHSNQSGLRFISGIINKD 200

  Fly   189 REYAFERMLWRISRGNVFVRRCDVDVALTDPKTGNVLHKSVFVVFFQGDQLQARIRKVCTGFHAH 253
            :...|||||:|.:|||:...:...|..:.||.|..::.|.||||||.|:|.:.:|.|:|..|.|:
plant   201 KLLKFERMLFRATRGNMLFNQTTSDEEIMDPSTSEMVEKVVFVVFFSGEQARTKILKICEAFGAN 265

  Fly   254 MYPCPSSHSERQEMVKNVRTRLEDLQVIINQTSDHRTCVLQAALKQLPTWSAMVKKMKGIYHTLN 318
            .||.|...::::::.:.|.:||.||:..::..:.||...|.:....|..|...|::.|.:|.|||
plant   266 CYPVPEDTTKQRQLTREVLSRLSDLEATLDAGTRHRNNALNSVGYSLTNWITTVRREKAVYDTLN 330

  Fly   319 LFNVDLGSKCLIGEGWVP---KREL-ELVEVALAAGSASVGSTVPSFINVLDTKKEPPTHFRTNK 379
            :.|.|:..|||:||||.|   |.:: |:::.|....|:.||    ...:|:...:.|||:|||||
plant   331 MLNFDVTKKCLVGEGWCPTFAKTQIHEVLQRATFDSSSQVG----VIFHVMQAVESPPTYFRTNK 391

  Fly   380 FTRGFQNLIDAYGIAGYREVNPGLYTCITFPFLFAVMFGDMGHGTILFLLGLWMVIDEKRLSKKR 444
            .|..||.:|||||:|.|:|.||.:|:.:|:||||||||||.|||..|.|..|:::..|::||.::
plant   392 LTNAFQEIIDAYGVARYQEANPAVYSVVTYPFLFAVMFGDWGHGLCLLLGALYLLARERKLSTQK 456

  Fly   445 GGEIWNIFFAGRYIIMLMGLFAMYTGFHYNDIFSKSINVFGTRWVNVYN-RTTVLTNP-TLQLNP 507
            .|....:.|.|||:|:||.||::|.|..||:.||...::||.   :.|. |.|..::. |:.|  
plant   457 LGSFMEMLFGGRYVILLMALFSIYCGLIYNEFFSVPFHIFGG---SAYKCRDTTCSDAYTVGL-- 516

  Fly   508 SVATRGVYPMGIDPIWQSASNKIIFLNTYKMKLSIIFGVLHMVFGVCMSVENFVFFKKYAYIILQ 572
             :..|..||.|:||.|:.:..::.:||:.|||:||:.|:..|..|:.:|..|..||.....|..|
plant   517 -IKYRDPYPFGVDPSWRGSRTELPYLNSLKMKMSILLGIAQMNLGLILSFFNARFFGSSLDIRYQ 580

  Fly   573 FVPQVLFLLLMFGYMCFMMFYKWVKYSPTTDVEADTPGCAPSVLIMFIDMVLFKTETALPGCDVN 637
            |:||::||..:|||:..::..||     .|..:||         :..:.:.:|.:.|...| :..
plant   581 FIPQMIFLNSLFGYLSLLIIIKW-----CTGSQAD---------LYHVMIYMFLSPTEELG-ENE 630

  Fly   638 MFPIQKNLEMIFLVVALLCIPWILLGKPLYI------KYQRRNRPAGPVEEVDEIVEKIEVTTGK 696
            :|..|:.|:::.|::|.:.:||:|..||..:      ::|.|........|||..||        
plant   631 LFWGQRPLQIVLLLLAFIAVPWMLFPKPFALRKIHMERFQGRTYGVLVSSEVDLDVE-------- 687

  Fly   697 EIIITEVAEAHESGGHSEEDDEPMSEIWIHQAIHTIEYILSTISHTASYLRLWALSLAHAQLSEV 761
                   .::...|||.||:.. .|||::||.||:||::|.::|:||||||||||||||::||.|
plant   688 -------PDSARGGGHHEEEFN-FSEIFVHQLIHSIEFVLGSVSNTASYLRLWALSLAHSELSTV 744

  Fly   762 LW--TMVLAMGLQMNGYVGAIGLFFIFAVWEFFTIAIMVMMEGLSAFLHTLRLHWVEFMSKFYVG 824
            .:  .::||.|.: |..:..||:    ||:.|.|..|::|||.||||||.|||||||||.||:.|
plant   745 FYEKVLLLAWGYE-NILIRLIGV----AVFAFATAFILLMMETLSAFLHALRLHWVEFMGKFFNG 804

  Fly   825 NGYPFTPFSF 834
            :||.|.||||
plant   805 DGYKFKPFSF 814

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha100-4NP_650720.1 V_ATPase_I 39..834 CDD:460232 305/830 (37%)
VHA-A1NP_850122.1 V_ATPase_I 36..814 CDD:460232 305/830 (37%)

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