DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Vha100-4 and atp6v0a2a

DIOPT Version :9

Sequence 1:NP_650720.1 Gene:Vha100-4 / 42214 FlyBaseID:FBgn0038613 Length:844 Species:Drosophila melanogaster
Sequence 2:XP_009303407.1 Gene:atp6v0a2a / 561469 ZFINID:ZDB-GENE-091113-4 Length:848 Species:Danio rerio


Alignment Length:857 Identity:375/857 - (43%)
Similarity:538/857 - (62%) Gaps:45/857 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 FRSEVMSLVQMYLQPEAAYDTIAALGEVGCVQFRDLNAKINAQQRKFIGEVRRCDELERRIRYVT 81
            ||||.|.|.|::||..:||..|:.|||:|.|:|||||..:::.||:|:.|::||:|:||.:.|:.
Zfish     5 FRSEEMCLAQLFLQSGSAYACISELGEMGLVEFRDLNPSVSSFQRRFVSEIKRCEEMERILGYLL 69

  Fly    82 AELNKEGHKVLDLMDDFPP-APQPREIIDLELHLEKTETEILELAANNVNLQTSYLELSEMIQVL 145
            .|:.|....|.:.  :.|| ||.|:.::::...|::.|.|:.|:|.|...||.:.|||.|...:|
Zfish    70 REIRKANIAVPEA--EVPPVAPAPKNVLEIMEQLQRLEVELSEVAKNKEKLQRNLLELMEYTHML 132

  Fly   146 ERTDQFFSDQESH-----------NFDLNKMGTHRDPEKSNGHLGFVAGVISREREYAFERMLWR 199
            ..|..|...:..|           :.:...:......::....||||:|:|.|.:..||||||||
Zfish   133 RITRSFVHSRSRHEALGPQYEEFPSLETESVTGCTSMQRLGAKLGFVSGLIQRVKVEAFERMLWR 197

  Fly   200 ISRGNVFVRRCDVDVALTDPKTGNVLHKSVFVVFFQGDQLQARIRKVCTGFHAHMYPCPSSHSER 264
            :.:|...:...:||.:|.|..||.:....||::.|.|||:..:::|:|..:|.|:||.|.:..||
Zfish   198 VCKGYTILSYAEVDESLADLDTGEIRKNVVFLISFWGDQIGQKVQKICDCYHCHIYPHPETDEER 262

  Fly   265 QEMVKNVRTRLEDLQVIINQTSDHRTCVLQAALKQLPTWSAMVKKMKGIYHTLNLFNVDLGSKCL 329
            .:::.::|||::||..::::|.|:...||..|.:...:|...|||||.|||.|||.:.|:.:|||
Zfish   263 ADVMDSLRTRIQDLHNVLHRTEDYLKQVLHKASESAQSWVLQVKKMKAIYHILNLCSFDVTNKCL 327

  Fly   330 IGEGWVPKRELELVEVALAAGSASVGSTVPSFINVLDTKKEPPTHFRTNKFTRGFQNLIDAYGIA 394
            |.|.|.|..:|..:..||..||....:|||||:|.:.:...|||..|:||||.|||::::|||:.
Zfish   328 IAEVWCPVSDLANLRRALEEGSRKGDATVPSFVNRIPSSDTPPTLLRSNKFTSGFQSIVEAYGVG 392

  Fly   395 GYREVNPGLYTCITFPFLFAVMFGDMGHGTILFLLGLWMVIDEKRLSKKR-GGEIWNIFFAGRYI 458
            .||||:|..:|.|||||||||||||:|||::|.|..||||:.||..:::| |.||....|.||||
Zfish   393 DYREVSPAPFTIITFPFLFAVMFGDLGHGSVLTLFALWMVLTEKDHTRRRPGNEIRMTLFDGRYI 457

  Fly   459 IMLMGLFAMYTGFHYNDIFSKSINVFGTRW-------VNVYNRTTVLTNPTLQLNPSVA--TRGV 514
            |::||||::|||..|||.||||:|:||:.|       ...:...|:.:|..|.|||:|:  ..|.
Zfish   458 ILMMGLFSIYTGLIYNDCFSKSLNIFGSAWSVKAMFTEQEWTNETLRSNMLLTLNPNVSGVFSGP 522

  Fly   515 YPMGIDPIWQSASNKIIFLNTYKMKLSIIFGVLHMVFGVCMSVENFVFFKKYAYIILQFVPQVLF 579
            ||:||||||..|.|::.|||:||||:|:|.||:||.|||.:||.|.:.|::...|.|.|:|::||
Zfish   523 YPLGIDPIWNMAVNRLTFLNSYKMKMSVIIGVVHMSFGVVLSVFNHLHFRQKYKIYLLFLPELLF 587

  Fly   580 LLLMFGYMCFMMFYKWVKYSPTTDVEADTPGCAPSVLIMFIDMVLFKTETALPGCDVNMFPIQKN 644
            ||.:|||:.||:||||:.|:      |.....|||:||.||:|.|.:.....|     ::|.|..
Zfish   588 LLCLFGYLAFMIFYKWLAYT------ARDSQLAPSILIHFINMFLMQANATSP-----LYPGQMG 641

  Fly   645 LEMIFLVVALLCIPWILLGKPLYIKYQRRNRPAGPVEEV------DEIVEKI-EVTTGKEIIITE 702
            |::..:|||||.:|.:|||||||:.:......:..:..|      .|.|.:: |......::..|
Zfish   642 LQVFLVVVALLSVPVLLLGKPLYLYWLHHGGKSLGIHRVCLCSCGYERVRRVSEEDLSPSVVHDE 706

  Fly   703 VAEAHESGGHSEEDDEPMSEIWIHQAIHTIEYILSTISHTASYLRLWALSLAHAQLSEVLWTMVL 767
            .....||||..|.|   ..::::|||||||||.|..||:||||||||||||||||||||||.||:
Zfish   707 EEGLSESGGPQEFD---FGDVFLHQAIHTIEYSLGCISNTASYLRLWALSLAHAQLSEVLWAMVM 768

  Fly   768 AMGLQMNGYVGAIGLFFIFAVWEFFTIAIMVMMEGLSAFLHTLRLHWVEFMSKFYVGNGYPFTPF 832
            .:||:::..:|.|.|..:|:|:...||:|:::|||||||||.||||||||.:|||.|.|..|.||
Zfish   769 RLGLRISSRLGVIFLVPVFSVFAVLTISILLVMEGLSAFLHALRLHWVEFQNKFYSGAGVKFAPF 833

  Fly   833 SFKDILIVVEDD 844
            .|..:..|.|.|
Zfish   834 DFSLLPSVFEQD 845

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha100-4NP_650720.1 NtpI 17..836 CDD:224188 372/847 (44%)
V_ATPase_I 40..834 CDD:279793 359/822 (44%)
atp6v0a2aXP_009303407.1 NtpI 26..833 CDD:224188 358/822 (44%)
V_ATPase_I 28..835 CDD:279793 359/822 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1269
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53812
OrthoDB 1 1.010 - - D164762at33208
OrthoFinder 1 1.000 - - FOG0000328
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100301
Panther 1 1.100 - - O PTHR11629
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X226
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.830

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