DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha100-4 and atp6v0a1b

DIOPT Version :9

Sequence 1:NP_650720.1 Gene:Vha100-4 / 42214 FlyBaseID:FBgn0038613 Length:844 Species:Drosophila melanogaster
Sequence 2:XP_009295518.1 Gene:atp6v0a1b / 553691 ZFINID:ZDB-GENE-050522-215 Length:868 Species:Danio rerio


Alignment Length:882 Identity:418/882 - (47%)
Similarity:572/882 - (64%) Gaps:82/882 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 IFRSEVMSLVQMYLQPEAAYDTIAALGEVGCVQFRDLNAKINAQQRKFIGEVRRCDELERRIRYV 80
            :||||.|:|.|::||.||||..::.|||:|.|||||||..:|..||||:.|||||:|::|::|:|
Zfish     4 LFRSEEMTLAQLFLQSEAAYCCVSELGELGMVQFRDLNPDVNVFQRKFVNEVRRCEEMDRKLRFV 68

  Fly    81 TAELNKEGHKVLDLMDDFPPAPQPREIIDLELHLEKTETEILELAANNVNLQTSYLELSEMIQVL 145
            ..|:.|.....:|..:: |..|.||::||||...||.|.|:.|:..|...|:.::|||:|:..:|
Zfish    69 EKEIKKANIPTMDTGEN-PEVPFPRDMIDLEATFEKLENELKEINTNQEALKKNFLELTELKHIL 132

  Fly   146 ERTDQFFSDQESHNFDLNKMGTHRDP-EKSNG---HLGFVAGVISREREYAFERMLWRISRGNVF 206
            .||.|||.:.|..|. |.:..:..|| |...|   .||||||||:|||...|||||||:.|||||
Zfish   133 RRTQQFFDEMEDPNL-LEESSSLLDPSEAGRGAPLRLGFVAGVINRERIPTFERMLWRVCRGNVF 196

  Fly   207 VRRCDVDVALTDPKTGNVLHKSVFVVFFQGDQLQARIRKVCTGFHAHMYPCPSSHSERQEMVKNV 271
            :|:.:::..|.||.||:.:|||||::|||||||:.|::|:|.||.|.:||||.:..||:||...|
Zfish   197 LRQTEIEDPLEDPTTGDQVHKSVFIIFFQGDQLKNRVKKICEGFRASLYPCPETPQERKEMASGV 261

  Fly   272 RTRLEDLQVIINQTSDHRTCVLQAALKQLPTWSAMVKKMKGIYHTLNLFNVDLGSKCLIGEGWVP 336
            .||::|||:::|||.|||..|||||.|.:..|...|:|||.|||||||.|:|:..||||.|.|.|
Zfish   262 NTRIDDLQMVLNQTEDHRQRVLQAAAKTMRVWFIKVRKMKAIYHTLNLCNIDVTQKCLIAEVWCP 326

  Fly   337 KRELELVEVALAAGSASVGSTVPSFINVLDTKKEPPTHFRTNKFTRGFQNLIDAYGIAGYREVNP 401
            ..:|:.::.||..|:...||||||.:|.:.||:.|||:.:|||||.||||::|||||..|||:||
Zfish   327 VSDLDSIQFALRRGTERSGSTVPSILNRMQTKQTPPTYNKTNKFTSGFQNIVDAYGIGTYREINP 391

  Fly   402 GLYTCITFPFLFAVMFGDMGHGTILFLLGLWMVIDEKR-LSKKRGGEIWNIFFAGRYIIMLMGLF 465
            ..||.|||||||||||||||||.::....|::|:.|.| |::|...|::|:.|||||||:|||:|
Zfish   392 APYTIITFPFLFAVMFGDMGHGVLMTSAALYLVLRETRLLAQKSDNEMFNMIFAGRYIILLMGMF 456

  Fly   466 AMYTGFHYNDIFSKSINVFGTRWV--------NVYNRTTVLTNPTLQLNPSVA--TRGVYPMGID 520
            ::|||..|||.||||:|:|.:.|.        ..:...|:.:|..|||||||:  ..|.||:|||
Zfish   457 SVYTGLIYNDCFSKSLNMFSSGWSVRPMFAPNGNWTDQTLESNSVLQLNPSVSGVFGGPYPLGID 521

  Fly   521 PIWQSASNKIIFLNTYKMKLSIIFGVLHMVFGVCMSVENFVFFKKYAYIILQFVPQVLFLLLMFG 585
            |||..|:||:.|||::|||:|:|.||:||:|||.:|:.|.::|||...|.|.|:|:::|:..:||
Zfish   522 PIWNIAANKLTFLNSFKMKMSVILGVIHMLFGVTLSLFNHLYFKKPLNIFLNFIPEIVFMSSLFG 586

  Fly   586 YMCFMMFYKWVKYSPTTDVEADTPGCAPSVLIMFIDMVLF--KTETALPGCDVNMFPIQKNLEMI 648
            |:..::||||:.|...|..:      |||:||.||:|.||  ...|..|     ::..|..::.:
Zfish   587 YLILLIFYKWIAYDAVTSKD------APSLLIAFINMCLFNYNDPTNKP-----LYRGQAGIQSL 640

  Fly   649 FLVVALLCIPWILLGKPLYIKYQ----------RRNRPA-------------------------- 677
            .:|:||.|:|.:|:.|.:.::.|          |..|||                          
Zfish   641 LVVIALACVPVMLVVKTMILRRQHLWKKHLSQMRDARPAENLETLEQTGTSSPPGLTQQGTQKFG 705

  Fly   678 ------GPVEEVDEIVEKIEVTTGKEIIITEVAEAHESGGHSEEDDEPMSEIWIHQAIHTIEYIL 736
                  ||.|:..||::..:::...|          |...||||:.....::.:|||||||||.|
Zfish   706 GVRVGNGPTEDEAEIIDHDQLSQHSE----------EGDEHSEEEPFNFGDMAVHQAIHTIEYCL 760

  Fly   737 STISHTASYLRLWALSLAHAQLSEVLWTMVLAMGLQMNGYVGAIGLFFIFAVWEFFTIAIMVMME 801
            ..||:||||||||||||||||||||||.||:.:||......|..||..||:.:...|:.|:::||
Zfish   761 GCISNTASYLRLWALSLAHAQLSEVLWGMVMRLGLSSRSGGGFFGLSIIFSAFATLTVCILLIME 825

  Fly   802 GLSAFLHTLRLHWVEFMSKFYVGNGYPFTPFSFKDIL 838
            |||||||.||||||||.:|||.|.|:.|.||||:.||
Zfish   826 GLSAFLHALRLHWVEFQNKFYTGQGFKFVPFSFESIL 862

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha100-4NP_650720.1 NtpI 17..836 CDD:224188 416/877 (47%)
V_ATPase_I 40..834 CDD:279793 401/852 (47%)
atp6v0a1bXP_009295518.1 NtpI 27..860 CDD:224188 403/855 (47%)
V_ATPase_I 28..858 CDD:279793 401/852 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582319
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1269
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53812
OrthoDB 1 1.010 - - D164762at33208
OrthoFinder 1 1.000 - - FOG0000328
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100301
Panther 1 1.100 - - O PTHR11629
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X226
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1110.720

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