DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha100-4 and tcirg1

DIOPT Version :10

Sequence 1:NP_650720.1 Gene:Vha100-4 / 42214 FlyBaseID:FBgn0038613 Length:844 Species:Drosophila melanogaster
Sequence 2:XP_012809053.3 Gene:tcirg1 / 549603 XenbaseID:XB-GENE-5721917 Length:865 Species:Xenopus tropicalis


Alignment Length:840 Identity:350/840 - (41%)
Similarity:511/840 - (60%) Gaps:41/840 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 SIFRSEVMSLVQMYLQPEAAYDTIAALGEVGCVQFRDLNAKINAQQRKFIGEVRRCDELERRIRY 79
            |:||.|.|.|.|::||..:.|..::||||:|.|:|||||..:|:.||:::.|:|||||:|....|
 Frog    45 SLFRGEEMCLAQLFLQSGSEYQCVSALGELGLVEFRDLNQNVNSFQRRYVSEIRRCDEMETTFSY 109

  Fly    80 VTAELNKEGHKVLDLMDDFPPAPQPREIIDLELHLEKTETEILELAANNVNLQTSYLELSEMIQV 144
            :..||.|.|.:|.: .:..||||.||:.|.::...|:...|:.|::.|...||....||.|...:
 Frog   110 LERELRKAGVQVPE-SEMSPPAPLPRDAIRMQEESEQLAKELREVSQNRQTLQERLRELLEYANI 173

  Fly   145 LERTDQF---FSDQESHNFDLNKMGTHRDP---EKSNGHLGFVAGVISREREYAFERMLWRISRG 203
            |..:.:|   ..:.|:...|.::.....||   .|.:..:.|:||||...|..:|||:|||..||
 Frog   174 LRESQRFTGPLLESEAQWKDRSEDDPLLDPAVVNKQDLRVSFMAGVIHPWRMNSFERLLWRACRG 238

  Fly   204 NVFVRRCDVDVALTDPKTGNVLHKSVFVVFFQGDQLQARIRKVCTGFHAHMYPCPSSHSERQEMV 268
            .:.|...::...:.|..||..:.:.:|::.:.|:::..:|:|:...||.|:||.....:.|.|.:
 Frog   239 YLIVNFVEMSEPMEDLVTGESVTQIIFLISYWGEKIGEKIKKIANCFHCHIYPYADDETSRLETL 303

  Fly   269 KNVRTRLEDLQVIINQTSDHRTCVLQAALKQLPTWSAMVKKMKGIYHTLNLFNVDLGSKCLIGEG 333
            :|:..:::|:|.::.||..:.:.||..|...|..|...|:|||.||..|||.:|  ..:|||||.
 Frog   304 RNLLVQIQDMQKVLLQTEGYLSQVLSRAASALHHWRVSVRKMKHIYLILNLCSV--RERCLIGEV 366

  Fly   334 WVPKRELELVEVALAAGSASVGSTVPSFINVLDTKKEPPTHFRTNKFTRGFQNLIDAYGIAGYRE 398
            |.|..:|.|::.||...|.|.|....||.:.:.....|||..||||||.|||.::||||:|.|:|
 Frog   367 WCPVVDLPLLQSALTRASESSGGGGESFCHRIPCAFSPPTLIRTNKFTSGFQGIVDAYGVATYQE 431

  Fly   399 VNPGLYTCITFPFLFAVMFGDMGHGTILFLLGLWMVIDEKRLSKKRG-GEIWNIFFAGRYIIMLM 462
            |||.:::.|||||||||||||:|||.|:||..||:|:.|.....:|. .||:::.|.|||:|:||
 Frog   432 VNPAIFSIITFPFLFAVMFGDVGHGAIMFLFALWLVLGENDPKLRRSEDEIFSMCFGGRYLILLM 496

  Fly   463 GLFAMYTGFHYNDIFSKSINVFGTRW-------VNVYNRTTVLTNPTLQLNPSVATRGV----YP 516
            |..::||||.||:.||:...:|.:.|       .|.:...::...|.:.|||::.  ||    ||
 Frog   497 GALSVYTGFVYNECFSRPAVIFNSGWSVASMARANNWTSDSINKLPPIPLNPNIT--GVFTAPYP 559

  Fly   517 MGIDPIWQSASNKIIFLNTYKMKLSIIFGVLHMVFGVCMSVENFVFFKKYAYIILQFVPQVLFLL 581
            .||||||..|.|::.|||::|||:|:|.||.||.||||:||.|||.|::...|.|..:|::||||
 Frog   560 FGIDPIWSLAVNRLTFLNSFKMKMSVILGVCHMAFGVCLSVFNFVHFRQIYRIFLITLPELLFLL 624

  Fly   582 LMFGYMCFMMFYKWVKYSPTTDVEADTPGCAPSVLIMFIDMVLFKTETALPGCDVNMFPIQKNLE 646
            .:|||:.||:.|||:.      :.|:....|||:||.||||.||   |..|| :.:::..|:.::
 Frog   625 CLFGYLVFMVVYKWIV------LTAEDAEWAPSILIHFIDMFLF---TQNPG-NRDLYQGQQVVQ 679

  Fly   647 MIFLVVALLCIPWILLGKPLYIKYQRRNRPAGPVEEVDEIVEKIEVTTG-KEIIITEVAEAHESG 710
            .:.::||:||||.:|||.|:.:..|.|::.....:      .:..:..| :|.::.:........
 Frog   680 TVLVIVAILCIPVLLLGDPICLLIQHRSKKDSSHQ------NRCSLNNGDREALLEDEITVPTGH 738

  Fly   711 GHSEEDDEPMSEIWIHQAIHTIEYILSTISHTASYLRLWALSLAHAQLSEVLWTMVLAMGLQMNG 775
            ||..|..: .:|:::||.||||||.|..||:||||||||||||||||||||||.||:.:|.....
 Frog   739 GHGSEKFD-TAEVFMHQMIHTIEYCLGCISNTASYLRLWALSLAHAQLSEVLWNMVIRIGFSKLS 802

  Fly   776 YVGAIGLFFIFAVWEFFTIAIMVMMEGLSAFLHTLRLHWVEFMSKFYVGNGYPFTPFSFK 835
            ....|.|..|||.:...|:||:::|||||||||.||||||||.:|||.|.||.|.||.|:
 Frog   803 LTWGIVLVPIFAFFAVLTVAILLIMEGLSAFLHALRLHWVEFQNKFYSGEGYKFFPFCFE 862

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha100-4NP_650720.1 V_ATPase_I 39..834 CDD:460232 339/813 (42%)
tcirg1XP_012809053.3 V_ATPase_I 69..861 CDD:460232 339/813 (42%)

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