DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha100-4 and Vha100-1

DIOPT Version :9

Sequence 1:NP_650720.1 Gene:Vha100-4 / 42214 FlyBaseID:FBgn0038613 Length:844 Species:Drosophila melanogaster
Sequence 2:NP_651672.1 Gene:Vha100-1 / 43442 FlyBaseID:FBgn0028671 Length:855 Species:Drosophila melanogaster


Alignment Length:856 Identity:450/856 - (52%)
Similarity:585/856 - (68%) Gaps:44/856 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 SIFRSEVMSLVQMYLQPEAAYDTIAALGEVGCVQFRDLNAKINAQQRKFIGEVRRCDELERRIRY 79
            |:||||.|:|.|::||.||||..::.|||:|.|||||||..:||.||||:.|||||||:||::||
  Fly     3 SLFRSEEMALCQLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRKFVNEVRRCDEMERKLRY 67

  Fly    80 VTAELNKEGHKVLDLMDDFPPAPQPREIIDLELHLEKTETEILELAANNVNLQTSYLELSEMIQV 144
            :..|:.|:|..:|| ..:.|.||||||:||||...||.|.|:.|:..|...|:.::|||:|:..:
  Fly    68 LEKEIKKDGIPMLD-TGESPEAPQPREMIDLEATFEKLENELREVNQNAEALKRNFLELTELKHI 131

  Fly   145 LERTDQFFSDQ-----------------------ESHNFD-----LNKMGTHRDPEKSNGHLGFV 181
            |.:|..||.:.                       ::.|.|     |.:.|........|..||||
  Fly   132 LRKTQVFFDESVPTVYKSSGAYSSSKYRRYPQMADNQNEDEQAQLLGEEGVRASQPGQNLKLGFV 196

  Fly   182 AGVISREREYAFERMLWRISRGNVFVRRCDVDVALTDPKTGNVLHKSVFVVFFQGDQLQARIRKV 246
            ||||.|||..||||||||..|||||:|:..::..|.||..|:.:|||||::|||||||:.|::|:
  Fly   197 AGVILRERLPAFERMLWRACRGNVFLRQAMIETPLEDPTNGDQVHKSVFIIFFQGDQLKTRVKKI 261

  Fly   247 CTGFHAHMYPCPSSHSERQEMVKNVRTRLEDLQVIINQTSDHRTCVLQAALKQLPTWSAMVKKMK 311
            |.||.|.:||||.:.::|:||...|.||:|||..::.||.|||..||.||.|.|..|...|:|:|
  Fly   262 CEGFRATLYPCPEAPADRREMAMGVMTRIEDLNTVLGQTQDHRHRVLVAAAKNLKNWFVKVRKIK 326

  Fly   312 GIYHTLNLFNVDLGSKCLIGEGWVPKRELELVEVALAAGSASVGSTVPSFINVLDTKKEPPTHFR 376
            .|||||||||:|:..||||.|.|||..::|.:::||..|:...||:||..:|.:.|.:.|||:.|
  Fly   327 AIYHTLNLFNLDVTQKCLIAECWVPLLDIETIQLALRRGTERSGSSVPPILNRMQTFENPPTYNR 391

  Fly   377 TNKFTRGFQNLIDAYGIAGYREVNPGLYTCITFPFLFAVMFGDMGHGTILFLLGLWMVIDEKRL- 440
            |||||:.||.||||||:|.|||:||..||.|||||||||||||:|||.|:.|.||||:..||.| 
  Fly   392 TNKFTKAFQALIDAYGVASYREMNPAPYTIITFPFLFAVMFGDLGHGAIMALFGLWMIRKEKGLA 456

  Fly   441 SKKRGGEIWNIFFAGRYIIMLMGLFAMYTGFHYNDIFSKSINVFGTRWVNVYNRTTVLTNPTLQL 505
            ::|...|||||||.|||||.|||:|:||||..||||||||:|:||:.|...||::||:.|..|||
  Fly   457 AQKTDNEIWNIFFGGRYIIFLMGVFSMYTGLIYNDIFSKSLNIFGSHWHLSYNKSTVMENKFLQL 521

  Fly   506 NPSVATRGV-YPMGIDPIWQSA-SNKIIFLNTYKMKLSIIFGVLHMVFGVCMSVENFVFFKKYAY 568
            :|.....|. ||.|:|||||.| :|||||.|.||||:||||||:||:|||.||..|..:|:....
  Fly   522 SPKGDYEGAPYPFGMDPIWQVAGANKIIFHNAYKMKISIIFGVIHMIFGVVMSWHNHTYFRNRIS 586

  Fly   569 IILQFVPQVLFLLLMFGYMCFMMFYKWVKYSPTTDVEADTPGCAPSVLIMFIDMVLFKTETALP- 632
            ::.:|:||::||||:|.||..:||.||:|::.|.| :..:..||||:||.|||||||.|....| 
  Fly   587 LLYEFIPQLVFLLLLFFYMVLLMFIKWIKFAATND-KPYSEACAPSILITFIDMVLFNTPKPPPE 650

  Fly   633 GCDVNMFPIQKNLEMIFLVVALLCIPWILLGKPLYIKYQRRNRPAGPVEEVDEIVEKIEVTTGKE 697
            .|:..||..|..::::|::||:.|||.:||.|||.|...|:.....|:.......|...|:.   
  Fly   651 NCETYMFMGQHFIQVLFVLVAVGCIPVMLLAKPLLIMQARKQANVQPIAGATSDAEAGGVSN--- 712

  Fly   698 IIITEVAEAHESGGHSEEDDEPMSEIWIHQAIHTIEYILSTISHTASYLRLWALSLAHAQLSEVL 762
                  :.:|..||..||::| :|||:|||:||||||:|.::|||||||||||||||||||:|||
  Fly   713 ------SGSHGGGGGHEEEEE-LSEIFIHQSIHTIEYVLGSVSHTASYLRLWALSLAHAQLAEVL 770

  Fly   763 WTMVLAMGLQMNGYVGAIGLFFIFAVWEFFTIAIMVMMEGLSAFLHTLRLHWVEFMSKFYVGNGY 827
            |||||::||:..|.||.|.|..:||.|...|:.|:|:||||||||||||||||||.||||.|.||
  Fly   771 WTMVLSIGLKQEGPVGGIVLTCVFAFWAILTVGILVLMEGLSAFLHTLRLHWVEFQSKFYKGQGY 835

  Fly   828 PFTPFSFKDIL 838
            .|.||||..|:
  Fly   836 AFQPFSFDAII 846

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha100-4NP_650720.1 NtpI 17..836 CDD:224188 448/850 (53%)
V_ATPase_I 40..834 CDD:279793 433/825 (52%)
Vha100-1NP_651672.1 NtpI 27..842 CDD:224188 433/826 (52%)
V_ATPase_I 28..842 CDD:279793 433/825 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451290
Domainoid 1 1.000 601 1.000 Domainoid score I37
eggNOG 1 0.900 - - E1_COG1269
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 618 1.000 Inparanoid score I211
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D164762at33208
OrthoFinder 1 1.000 - - FOG0000328
OrthoInspector 1 1.000 - - mtm1001
orthoMCL 1 0.900 - - OOG6_100301
Panther 1 1.100 - - P PTHR11629
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X226
1110.800

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