DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha100-4 and atp6v0a1a

DIOPT Version :9

Sequence 1:NP_650720.1 Gene:Vha100-4 / 42214 FlyBaseID:FBgn0038613 Length:844 Species:Drosophila melanogaster
Sequence 2:XP_005163855.1 Gene:atp6v0a1a / 324307 ZFINID:ZDB-GENE-030131-3027 Length:840 Species:Danio rerio


Alignment Length:859 Identity:412/859 - (47%)
Similarity:571/859 - (66%) Gaps:64/859 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 IFRSEVMSLVQMYLQPEAAYDTIAALGEVGCVQFRDLNAKINAQQRKFIGEVRRCDELERRIRYV 80
            :||||.|:|.|::||.|:||..::.|||:|.|||||||..:||.||||:.|||||:|::|::|:|
Zfish     4 LFRSEEMTLAQLFLQSESAYCCVSELGEIGMVQFRDLNPDVNAFQRKFVNEVRRCEEMDRKLRFV 68

  Fly    81 TAELNKEGHKVLDLMDDFPPAPQPREIIDLELHLEKTETEILELAANNVNLQTSYLELSEMIQVL 145
            ..|:.|....::|..:: |..|.||::||||...||.|.|:.|:..|...|:.::|||:|:..:|
Zfish    69 EKEIKKANIPIVDTGEN-PEVPFPRDMIDLEATFEKLENELKEINTNQEALKKNFLELTELKHIL 132

  Fly   146 ERTDQFFSDQESHNFDLNKMGTHRDPEKSNG----HLGFVAGVISREREYAFERMLWRISRGNVF 206
            .||.|||.:.|..:. |.:..|..||.:...    .||||||||.|||...|||||||:.|||||
Zfish   133 RRTQQFFDEMEDPSL-LEESSTLLDPNEVGRAAPLRLGFVAGVIGRERIPTFERMLWRVCRGNVF 196

  Fly   207 VRRCDVDVALTDPKTGNVLHKSVFVVFFQGDQLQARIRKVCTGFHAHMYPCPSSHSERQEMVKNV 271
            :|:.|::..|.||.||:.:|||||::|||||||:.|::|:|.||.|.:||||.:..||:||...|
Zfish   197 LRQADIEDPLEDPATGDNVHKSVFIIFFQGDQLKNRVKKICEGFRASLYPCPETPQERKEMAAGV 261

  Fly   272 RTRLEDLQVIINQTSDHRTCVLQAALKQLPTWSAMVKKMKGIYHTLNLFNVDLGSKCLIGEGWVP 336
            .||::|||:::|||.|||..|||||.|.:..|...|:|||.|||||||.|:|:..||||.|.|.|
Zfish   262 NTRIDDLQMVLNQTEDHRQRVLQAAAKTVRVWFIKVRKMKAIYHTLNLCNIDVTQKCLIAEIWCP 326

  Fly   337 KRELELVEVALAAGSASVGSTVPSFINVLDTKKEPPTHFRTNKFTRGFQNLIDAYGIAGYREVNP 401
            ..:|:.::.||..|:...||||||.:|.:.||:.|||:.:|||||.|||:::|||||:.|||:||
Zfish   327 VSDLDSIQFALRRGTERSGSTVPSILNRMQTKQTPPTYNKTNKFTSGFQSIVDAYGISNYREMNP 391

  Fly   402 GLYTCITFPFLFAVMFGDMGHGTILFLLGLWMVIDEKRL-SKKRGGEIWNIFFAGRYIIMLMGLF 465
            ..||.|||||||||||||:|||.::....|::|:.|.|| ::|...|::::.|||||||:|||||
Zfish   392 APYTIITFPFLFAVMFGDLGHGVLMTCAALYLVLRESRLIAQKNDSEMFSMVFAGRYIILLMGLF 456

  Fly   466 AMYTGFHYNDIFSKSINVFGTRW--------------VNVYNRTTVLTNPTLQLNPSVAT--RGV 514
            :||||..|||.||||:|:||:.|              ..|..::.|     |||||:|..  .|.
Zfish   457 SMYTGIIYNDCFSKSLNIFGSGWSVRPMFGEKGDNWTFAVLEKSNV-----LQLNPAVPNVFTGP 516

  Fly   515 YPMGIDPIWQSASNKIIFLNTYKMKLSIIFGVLHMVFGVCMSVENFVFFKKYAYIILQFVPQVLF 579
            ||:||||||..|:||:.|||::|||:|||.||:||:|||.:|:.|.::|:|...|.|.|:|:::|
Zfish   517 YPVGIDPIWNIATNKLTFLNSFKMKMSIILGVIHMIFGVSLSLFNHLYFRKPLNIYLGFIPEIIF 581

  Fly   580 LLLMFGYMCFMMFYKWVKYSPTTDVEADTPGCAPSVLIMFIDMVLF--KTETALPGCDVNMFPIQ 642
            ::.:|||:..::||||:.|      :|.:...|||:||.||:|.||  ...|..|     .:..|
Zfish   582 MVSLFGYLVLLIFYKWIAY------DAKSSRVAPSLLITFINMCLFSYNDPTNKP-----FYTGQ 635

  Fly   643 KNLEMIFLVVALLCIPWILLGKPLYIKYQ---RRNRPA----------GPVEEVDEIVEKIEVTT 694
            ..::.:.:::||.|:|.:|:.|.|.::.|   ||:...          ||.|:..||::..:::.
Zfish   636 VVIQCLLVIIALSCVPCMLIVKTLVMRRQHLWRRHLGTQNFGGIHVGNGPTEDEAEIIQHDQLSQ 700

  Fly   695 GKEIIITEVAEAHESGGHSEEDDEPMSEIWIHQAIHTIEYILSTISHTASYLRLWALSLAHAQLS 759
            ..|          |....|||:....::..:|||||||||.|..||:||||||||||||||||||
Zfish   701 NTE----------EEPEPSEEEVFNFADEAVHQAIHTIEYCLGCISNTASYLRLWALSLAHAQLS 755

  Fly   760 EVLWTMVLAMGLQMNGYVGAIGLFFIFAVWEFFTIAIMVMMEGLSAFLHTLRLHWVEFMSKFYVG 824
            ||||:||:.|||....:.|.|.|..||..:...|:.|:::|||||||||.|:||||||.:|||.|
Zfish   756 EVLWSMVMHMGLSSRSFGGFIFLSIIFCFFAVLTVFILLVMEGLSAFLHALKLHWVEFQNKFYTG 820

  Fly   825 NGYPFTPFSFKDIL 838
            .|:.|.||:|..||
Zfish   821 QGFKFMPFTFDSIL 834

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha100-4NP_650720.1 NtpI 17..836 CDD:224188 410/854 (48%)
V_ATPase_I 40..834 CDD:279793 397/829 (48%)
atp6v0a1aXP_005163855.1 NtpI 27..830 CDD:224188 397/830 (48%)
V_ATPase_I 28..830 CDD:279793 397/829 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582315
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1269
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53812
OrthoDB 1 1.010 - - D164762at33208
OrthoFinder 1 1.000 - - FOG0000328
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100301
Panther 1 1.100 - - O PTHR11629
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X226
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1110.720

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