DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha100-4 and vph1

DIOPT Version :10

Sequence 1:NP_650720.1 Gene:Vha100-4 / 42214 FlyBaseID:FBgn0038613 Length:844 Species:Drosophila melanogaster
Sequence 2:NP_594219.2 Gene:vph1 / 2542310 PomBaseID:SPAC16E8.07C Length:831 Species:Schizosaccharomyces pombe


Alignment Length:870 Identity:341/870 - (39%)
Similarity:482/870 - (55%) Gaps:91/870 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 SNSIFRSEVMSLVQMYLQPEAAYDTIAALGEVGCVQFRDLNAKINAQQRKFIGEVRRCDELERRI 77
            |.|:||||.:||||:||..|:|...::||||:..:.|:|||..:.|.||.|:.|:||..:.||.:
pombe     2 SPSLFRSEEVSLVQLYLPTESARPIMSALGELSTIHFKDLNPDVVAFQRSFVREIRRLTDTERLL 66

  Fly    78 RYVTAELNKEGHKVLDLMDDFPPA----PQPREIIDLELHLEKTETEILELAANNVNLQTSYLEL 138
            ||:.:|::..|..|.|  .:.||:    .:...|.|:...:.:.|..:.:|..::..|:..||:.
pombe    67 RYLHSEIDLNGIHVPD--HNLPPSYESVLESSTIEDIIERITRLEARVRQLVESSQLLEARYLQQ 129

  Fly   139 SEMIQVLERTDQFFS------DQESHNF---------------------DLNKMGTHRDPEKS-- 174
            .|...||.:.|.|||      |...:|:                     :|...||....|.|  
pombe   130 LEFANVLTKADAFFSKSGNTVDPLRNNYETSSIFSGEDDTTAPLIENALELGTTGTFDSEETSPQ 194

  Fly   175 -NGHLGFVAGVISREREYAFERMLWRISRGNVFVRRCDVDVALTDPKTGNVLHKSVFVVFFQGDQ 238
             |..|.||:|:|...:....||:|||..|||:|:.:...|.:|......|. .|::|:|...|.|
pombe   195 MNTTLDFVSGIIPTVKFQFLERILWRTLRGNLFIHQVRADDSLIHGAEKNE-EKTIFLVIAHGTQ 258

  Fly   239 LQARIRKVCTGFHAHMYPCPSSHSERQEMVKNVRTRLEDLQVIINQTSDHRTCVLQAALKQLPTW 303
            :..||||:.....|.::|.......|...::.....:.||..::..|.......|....:.:..|
pombe   259 ILLRIRKISESLGATLFPVEEDAPGRTSQIQQANVSISDLNAVLENTRSALYTELTFIAEHISAW 323

  Fly   304 SAMVKKMKGIYHTLNLFNVDLGSKCLIGEGWVPKRELELVEVALAAGSASVGSTVPSFINVLDTK 368
            .|::.|.|.::..:||||.|...||||.|||.|...|.:|:..|...|....|..|:.:||:.|.
pombe   324 EAVLHKDKTVFQVMNLFNYDQNHKCLIAEGWCPTANLPMVQKTLRNISDLTDSQAPTILNVVHTS 388

  Fly   369 KEPPTHFRTNKFTRGFQNLIDAYGIAGYREVNPGLYTCITFPFLFAVMFGDMGHGTILFLLGLWM 433
            ::|||:||.||||.|||::||:||||.|||||.|:...:|||||||:||||:|||.|:..:.|..
pombe   389 EQPPTYFRVNKFTEGFQSIIDSYGIATYREVNHGIVAIVTFPFLFAIMFGDLGHGAIMASVALMF 453

  Fly   434 VIDEKRL-SKKRGGEIWNIFFAGRYIIMLMGLFAMYTGFHYNDIFSKSINVFGTRWVNVYNRTTV 497
            |:.||.| :||...||..:.|.||||::|||||:||.||.|||:|||.:::|.:|||........
pombe   454 VLYEKTLGAKKDLDEIVGMVFYGRYIVLLMGLFSMYVGFVYNDLFSKPMSIFSSRWVWPVKSEEA 518

  Fly   498 LTNPTLQLNPSVATRGVYPMGIDPIWQSASNKIIFLNTYKMKLSIIFGVLHMVFGVCMSVENFVF 562
            :.. .:|:       |.||:||||.|.||.|.::|:|:||||||||.||:||.|.:.:|:.|:.|
pombe   519 IAR-AVQV-------GTYPIGIDPTWHSADNNLLFMNSYKMKLSIILGVIHMTFCLFLSLSNYRF 575

  Fly   563 FKKYAYIILQFVPQVLFLLLMFGYMCFMMFYKWVKYSPTTDVEADTPGCAPSVLIMFIDMVLFKT 627
            ||:...|...|||.::||..:|||:...:.|||.......|::      .||:|.|.|.|.|   
pombe   576 FKRKLDIYAVFVPSLIFLEAIFGYLVITIVYKWCIDWKAKDLQ------PPSLLNMLILMFL--- 631

  Fly   628 ETALPG-CDVNMFPIQKNLEMIFLVVALLCIPWILLGKPLYI---------KYQRRNRPAGPVEE 682
               .|| .:..::|.||.|::..::.||:|:||:|:.||..:         |||..|.....|:|
pombe   632 ---SPGTLEDQLYPGQKYLQVGLVIAALICVPWLLIVKPFVLWRRHSNEENKYQSLNSDLPNVDE 693

  Fly   683 VDEIVEKIEVTTGKEIIITEVAEAHESGGHSEEDDEP--MSEIWIHQAIHTIEYILSTISHTASY 745
            .|.::                  |.:|   .|:..||  :.|:.|||.|||||:.|..:||||||
pombe   694 ADALM------------------AVDS---QEKQAEPFELGEVVIHQVIHTIEFCLGCVSHTASY 737

  Fly   746 LRLWALSLAHAQLSEVLWTMVLAMGLQMNGYVGAIGLFFIFAVWEFFTIAIMVMMEGLSAFLHTL 810
            ||||||||||.|||.|||.|.||.|.:|.|.||:|.:..:|..|...|..::|.|||.||.||:|
pombe   738 LRLWALSLAHNQLSSVLWNMTLANGFRMTGIVGSIFVVILFGFWFIATCVVLVAMEGTSAMLHSL 802

  Fly   811 RLHWVEFMSKFYVGNGYPFTPFSFK 835
            ||||||.|||.:.|.||.||||:||
pombe   803 RLHWVEGMSKHFEGEGYAFTPFTFK 827

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha100-4NP_650720.1 V_ATPase_I 39..834 CDD:460232 325/841 (39%)
vph1NP_594219.2 V_ATPase_I 28..826 CDD:460232 325/841 (39%)

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