DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha100-4 and Vha100-3

DIOPT Version :9

Sequence 1:NP_650720.1 Gene:Vha100-4 / 42214 FlyBaseID:FBgn0038613 Length:844 Species:Drosophila melanogaster
Sequence 2:NP_725837.1 Gene:Vha100-3 / 246543 FlyBaseID:FBgn0028669 Length:904 Species:Drosophila melanogaster


Alignment Length:911 Identity:308/911 - (33%)
Similarity:477/911 - (52%) Gaps:117/911 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 SIFRSEVMSLVQMYLQPEAAYDTIAALGEVGCVQFRDLNAKINAQQRKFIGEVRRCDELERRIRY 79
            |.||||.|.|.|:.|..|.|:|.:..:|..|.|||.::..:.......:..:|.:|.||.|    
  Fly    13 SFFRSEDMDLCQLLLHTENAFDCLIEVGHHGAVQFNNVYDEDRLLNNLYSKKVTQCYELLR---- 73

  Fly    80 VTAELNKEGHKVLDLMDDFPPAPQPREI----IDLELHLEKTETEILELAANNVNLQTSYLELSE 140
                       ::|.:..:.......||    :|.|..|::.     :||..:.:|:..::|.|.
  Fly    74 -----------IVDSLHTYIVQLHVNEIFYPDVDRENRLKEK-----DLAKYSDSLKRIHVEASA 122

  Fly   141 MIQVLERTDQFFSDQESHNFDLNK--------------------MGTHRDPEKSNG----HLGFV 181
            :.:...|.|...:....|:|.|||                    :|..:|...::|    ||.::
  Fly   123 VTEHYYRLDSRRNRMMEHSFALNKANKYMVSDMGSELLYSESTVIGLVQDATTTSGAYPAHLNYM 187

  Fly   182 AGVISREREYAFERMLWRISRGNVFVRRCDVDVALTDPKTG---NVLHKSVFVVFFQGDQLQARI 243
            .|.|..::.|:||.:|:|:...|:.:|..::...:.:...|   ..:.|...::......:..::
  Fly   188 IGCIRADKFYSFELLLYRLCSFNLIIRFSEMPSPVYEYHYGYKPERVRKFAILMMASSTMIWPKV 252

  Fly   244 RKVCTGFHAHMYPCPSSHSERQEMVKNVRTRLEDLQVIINQTSDHRTCVLQAALKQLPTWSAMVK 308
            .|:|..:|.::|.||||.|:|::.||.:...:.:::.::.:....|..:|:.|.:.|......::
  Fly   253 LKICAHYHVNIYDCPSSASQREDKVKELSQEIVNVEKVLKEAELMRRQILEVAGRDLFIIRVNLR 317

  Fly   309 KMKGIYHTLNLFNVDLG---SKCLIGEGWVPKRELELVEVAL------AAGSASVGSTVPSFINV 364
            |...:|..:|...:..|   .:.|:.|.::|..::..|||.|      :.|:.::.|:....:|.
  Fly   318 KALKVYDLMNRLRLVGGVEVPRYLLAEVYIPSSDVPEVEVILRNASRISGGADNIDSSDEDEMND 382

  Fly   365 LDT--------------------------KKE------PPTHFRTNKFTRGFQNLIDAYGIAGYR 397
            :.|                          ||.      |||:||.|||||||||||||||:|.|:
  Fly   383 MKTMPNTTPYPIEADFQPLEDMSAGAILLKKNRLVNHMPPTYFRLNKFTRGFQNLIDAYGMADYK 447

  Fly   398 EVNPGLYTCITFPFLFAVMFGDMGHGTILFLLGLWMV-----IDEKRLSKKRGGEIWNIFFAGRY 457
            |:||..||.|||||||||||||:|||.:|.|....|:     |::.:::.....||.||.:||||
  Fly   448 ELNPAPYTIITFPFLFAVMFGDLGHGILLILFSSLMIWKHREIEKYQINATSENEILNILYAGRY 512

  Fly   458 IIMLMGLFAMYTGFHYNDIFSKSINVFGTRWVNVYNRTTVLTNPTLQL-----NPSVATRGVYPM 517
            ||:|||:|::|.|..||.:.:|..|:||:.|...||.|||. :|...:     :|...:...||:
  Fly   513 IILLMGVFSVYMGLVYNIVMAKGFNLFGSSWSCRYNETTVY-DPAFHVTLDSSHPHFYSGHPYPL 576

  Fly   518 GIDPIWQ-SASNKIIFLNTYKMKLSIIFGVLHMVFGVCMSVENFVFFKKYAYIILQFVPQVLFLL 581
            |:||:|. ...:.|...|:.|||::|:.|:..|:||:.::..|.|...:.|.:||..:||::|:|
  Fly   577 GMDPVWAVCGQDSITTTNSLKMKMAIVLGISQMMFGLGLAAANCVLMNRKADLILVVIPQMIFML 641

  Fly   582 LMFGYMCFMMFYKWVKYSPTTDVEADTPGCAPSVLIMFIDMVLFKTETALPGCDVNMFPIQKNLE 646
            .:|||:.|::||||:.|........:. .|||||||.||:|:|.|.|..:..|...|:|.::.:|
  Fly   642 CLFGYLVFLIFYKWMSYGGHKPAPYNA-ACAPSVLITFINMMLMKKEDPVENCLDYMYPNERMIE 705

  Fly   647 MIFLVVALLCIPWILLGKPLYIKYQRRNRPAGPVEEVDEIVEKIEVTTGKEIIIT------EVAE 705
            ...:.:|...||.:|.|||:|:..:||...    :|.:...:::...|..|:..|      :.:|
  Fly   706 FALVGIAFCTIPILLAGKPIYLMRRRRKMQ----QERERDFKRMRRQTIAEMRSTMRYTDDDNSE 766

  Fly   706 AHESGGHSEEDDEPMSEIWIHQAIHTIEYILSTISHTASYLRLWALSLAHAQLSEVLWTMVLAMG 770
            .........|::..|||||||..|||||.:|.::||||||||||||||||.|||:|||.|||..|
  Fly   767 TSRQKSVDNEEEHEMSEIWIHSGIHTIETVLGSVSHTASYLRLWALSLAHDQLSDVLWHMVLTKG 831

  Fly   771 L--QMNGYVGAIGLFFIFAVWEFFTIAIMVMMEGLSAFLHTLRLHWVEFMSKFYVGNGYPFTPFS 833
            .  .:..|.|...|...|..|...|:||:||||||||||||||||||||.|||:.|.|..|..|:
  Fly   832 FANTLPLYYGVPVLMATFFAWAILTVAILVMMEGLSAFLHTLRLHWVEFQSKFFGGAGESFKAFN 896

  Fly   834 F 834
            |
  Fly   897 F 897

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha100-4NP_650720.1 NtpI 17..836 CDD:224188 307/909 (34%)
V_ATPase_I 40..834 CDD:279793 295/884 (33%)
Vha100-3NP_725837.1 V_ATPase_I 38..897 CDD:279793 295/884 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451293
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1269
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D164762at33208
OrthoFinder 1 1.000 - - FOG0000328
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100301
Panther 1 1.100 - - P PTHR11629
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
76.750

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