DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Vha100-4 and Atp6v0a2

DIOPT Version :9

Sequence 1:NP_650720.1 Gene:Vha100-4 / 42214 FlyBaseID:FBgn0038613 Length:844 Species:Drosophila melanogaster
Sequence 2:NP_446227.2 Gene:Atp6v0a2 / 116455 RGDID:621006 Length:856 Species:Rattus norvegicus


Alignment Length:865 Identity:368/865 - (42%)
Similarity:541/865 - (62%) Gaps:70/865 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 SIFRSEVMSLVQMYLQPEAAYDTIAALGEVGCVQFRDLNAKINAQQRKFIGEVRRCDELERRIRY 79
            |:||||.|.|.|::||...||:.::||||.|.|||||||..:::.||||:|||:||:||||.:.|
  Rat     3 SLFRSESMCLAQLFLQSGTAYECLSALGEKGLVQFRDLNQNVSSFQRKFVGEVKRCEELERILVY 67

  Fly    80 VTAELNK------EGHKVLDLMDDFPPAPQPREIIDLELHLEKTETEILELAANNVNLQTSYLEL 138
            :..|:.:      ||       :..||||..:.:::::..|:|.|.|:.|:..|...|:.:.|||
  Rat    68 LVQEITRADIPLPEG-------EASPPAPPVKHVLEMQEQLQKLEVELREVTKNKEKLRKNLLEL 125

  Fly   139 SEMIQVLERTDQFF--------SDQESHNFDLNKMGTHRDPEKSNGHLGFVAGVISREREYAFER 195
            .|...:|..|..|.        :.:|....:.:.:..:...::....||||:|:|.:.:..||||
  Rat   126 VEYTHMLRVTKTFLKRNVEFEPTYEEFPALESDSLLDYSCMQRLGAKLGFVSGLIQQGKVEAFER 190

  Fly   196 MLWRISRGNVFVRRCDVDVALTDPKTGNVLHKSVFVVFFQGDQLQARIRKVCTGFHAHMYPCPSS 260
            ||||..:|...|...::|.||.||:||.|:...||::.|.|:|:..:::|:|..:|.|:||.|::
  Rat   191 MLWRACKGYTIVTYAELDEALEDPETGEVIKWYVFLISFWGEQIGHKVKKICDCYHCHIYPYPNT 255

  Fly   261 HSERQEMVKNVRTRLEDLQVIINQTSDHRTCVLQAALKQLPTWSAMVKKMKGIYHTLNLFNVDLG 325
            ..||:|:.:.:.||::||..::::|.|:...||..|.:.:.:....|:|||.|||.||:.:.|:.
  Rat   256 AEERREIQEGLNTRIQDLYTVLHKTEDYLRQVLCKAAESVCSRVIQVRKMKAIYHMLNMCSFDVT 320

  Fly   326 SKCLIGEGWVPKRELELVEVALAAGSASVGSTVPSFINVLDTKKEPPTHFRTNKFTRGFQNLIDA 390
            :||||.|.|.|:.:|..:..||..||...|:|:|||:|.:.||:.|||..||||||.||||::||
  Rat   321 NKCLIAEVWCPEVDLPGLRRALEEGSRESGATIPSFMNTIPTKETPPTLIRTNKFTEGFQNIVDA 385

  Fly   391 YGIAGYREVNPGLYTCITFPFLFAVMFGDMGHGTILFLLGLWMVIDEK--RLSKKRGGEIWNIFF 453
            ||:..||||||.|:|.|||||||.|||||:|||.::||..|.:|::|.  |||:.:  ||..:||
  Rat   386 YGVGSYREVNPALFTIITFPFLFGVMFGDLGHGFVMFLFALLLVLNENHPRLSQSQ--EILRMFF 448

  Fly   454 AGRYIIMLMGLFAMYTGFHYNDIFSKSINVFGTRWVNV------------------YNRTTVLTN 500
            .||||::|||||::|||..|||.||||:|:||:.| ||                  :|.:|:..:
  Rat   449 DGRYILLLMGLFSVYTGLIYNDCFSKSLNLFGSGW-NVSAMYSSSHSPEEQRKMVLWNDSTIRHS 512

  Fly   501 PTLQLNPSV--ATRGVYPMGIDPIWQSASNKIIFLNTYKMKLSIIFGVLHMVFGVCMSVENFVFF 563
            .||||:|::  ..||.||.||||||..|:|::.|||::|||:|:|.|:.||.|||.:.:.|.:.|
  Rat   513 RTLQLDPNIPGVFRGPYPFGIDPIWNLATNRLTFLNSFKMKMSVILGIFHMTFGVILGIFNHLHF 577

  Fly   564 KKYAYIILQFVPQVLFLLLMFGYMCFMMFYKWVKYSPTTDVEADTPGCAPSVLIMFIDMVLF-KT 627
            :|...|.|..||::||:|.:|||:.||:.|||:.||..|..|      |||:||.||:|.|| .:
  Rat   578 RKKFNIYLVSVPEILFMLCIFGYLIFMIIYKWLAYSAETSRE------APSILIEFINMFLFPSS 636

  Fly   628 ETALPGCDVNMFPIQKNLEMIFLVVALLCIPWILLGKPLYIKYQRRNRPA-GPVEEVDEIVEKIE 691
            ||.      .::|.|.:::.:.|.:.:|.:|.:.|||||::.:....|.. |.......:|.|  
  Rat   637 ETH------GLYPGQAHVQKVLLALTVLAVPVLFLGKPLFLLWLHNGRSCFGVSRSGYTLVRK-- 693

  Fly   692 VTTGKEIIITEVAEAHESGGHSEEDDEPMS-------EIWIHQAIHTIEYILSTISHTASYLRLW 749
             .:.:|:.:....:..|.....||....|:       ||.:.||||:|||.|..||:||||||||
  Rat   694 -DSEEEVSLLGSQDIEEGNNRMEEGCREMTCEEFNFGEILMTQAIHSIEYCLGCISNTASYLRLW 757

  Fly   750 ALSLAHAQLSEVLWTMVLAMGLQMNGYVGAIGLFFIFAVWEFFTIAIMVMMEGLSAFLHTLRLHW 814
            ||||||||||:|||.|::.:||:::...|.:.|..:...:...|:.|:::|||||||||.:||||
  Rat   758 ALSLAHAQLSDVLWAMLMRVGLRVDNTYGVLLLLPVMTFFAVLTVFILLVMEGLSAFLHAIRLHW 822

  Fly   815 VEFMSKFYVGNGYPFTPFSF 834
            |||.:|||||.|..|.||||
  Rat   823 VEFQNKFYVGAGTKFVPFSF 842

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha100-4NP_650720.1 NtpI 17..836 CDD:224188 367/863 (43%)
V_ATPase_I 40..834 CDD:279793 354/838 (42%)
Atp6v0a2NP_446227.2 NtpI 5..839 CDD:224188 363/858 (42%)
V_ATPase_I 28..839 CDD:279793 352/835 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D164762at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.