DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7675 and Rdh13

DIOPT Version :9

Sequence 1:NP_001287390.1 Gene:CG7675 / 42211 FlyBaseID:FBgn0038610 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_001101938.1 Gene:Rdh13 / 361504 RGDID:1304959 Length:334 Species:Rattus norvegicus


Alignment Length:330 Identity:125/330 - (37%)
Similarity:188/330 - (56%) Gaps:28/330 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 RDIFLMTSVAAIVATLMSIRFYLRITAGRCFTETKMEGKTVIITGANSGIGKETAKDLAGRGARI 79
            |.:..::.|..::...:.::.|  :..|.|.::..:.|:|||:||||:||||:||.:||.||..|
  Rat     3 RFLLPVSVVGTVIGGTVLLKDY--VAGGACPSKATIPGRTVIVTGANTGIGKQTALELAKRGGNI 65

  Fly    80 IMACRNLETANAVKDEIVKETKNNKILVKKLDLGSQKSVREFAADIVKTEPKIDVLIHNAGMALA 144
            |:|||:.|...|...:|..||.|.::..:.|||.|.||:||||..|:|.|.::|:|::||.: :.
  Rat    66 ILACRDREKCEAAAKDIRGETLNPRVRAEHLDLASLKSIREFAGKIIKEEERVDILVNNAAV-MR 129

  Fly   145 FRGQTSEDGVELTMATNHYGPFLLTHLLIDVLKKSAPARIVIVASELYRLSSVNLAKLN-PIGTF 208
            ....|:|||.|:....||.|.||||:||:|.||.|||:||:.::|..:....::...|| .|..:
  Rat   130 CPHWTTEDGFEMQFGVNHLGHFLLTNLLLDKLKASAPSRIINLSSLAHVAGHIDFEDLNWQIKKY 194

  Fly   209 PAAYLYYVSKFANIYFARELAKRLEGTKVTVNFLHPGMIDSGIWR-----NVPFPLNLPMMAITK 268
            .....|..||.|.:.|.:||::||:||.||||.||||:..:.:.|     |..|          .
  Rat   195 DTKAAYCQSKLAVVLFTKELSRRLQGTGVTVNALHPGVARTELGRHTGMHNSAF----------S 249

  Fly   269 GF---------FKTTKAGAQTTIYLATSNEVANVSGKYFMDCKEATLNAAALDEEKGLKIWEESV 324
            ||         ||:.:..||.:.|||.:.|:.:||||||...:|...:..|.|||...::|.||.
  Rat   250 GFMLGPFFWLLFKSPQLAAQPSTYLAVAEELESVSGKYFDGLREKAPSPEAEDEEVARRLWTESA 314

  Fly   325 KIVKL 329
            .:|.|
  Rat   315 HLVGL 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7675NP_001287390.1 PRK06196 52..327 CDD:235736 118/289 (41%)
retinol-DH_like_SDR_c_like 52..320 CDD:212492 115/282 (41%)
Rdh13NP_001101938.1 NADB_Rossmann 38..313 CDD:419666 116/285 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1208
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53570
OrthoDB 1 1.010 - - D414554at33208
OrthoFinder 1 1.000 - - FOG0000061
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100091
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X72
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.730

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