DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7675 and Rdh11

DIOPT Version :10

Sequence 1:NP_650717.1 Gene:CG7675 / 42211 FlyBaseID:FBgn0038610 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_067532.2 Gene:Rdh11 / 17252 MGIID:102581 Length:316 Species:Mus musculus


Alignment Length:316 Identity:120/316 - (37%)
Similarity:187/316 - (59%) Gaps:4/316 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 FLMTSVAAIVATLMSIRFYLRITAGRCFTETKMEGKTVIITGANSGIGKETAKDLAGRGARIIMA 82
            ||:......:..|::.:....:::|.|.:..::.||..|:||||:|||||||||||.||||:.:|
Mouse     4 FLLLLSLPFILYLVTPKIRKMLSSGVCTSNVQLPGKVAIVTGANTGIGKETAKDLAQRGARVYLA 68

  Fly    83 CRNLETANAVKDEIVKETKNNKILVKKLDLGSQKSVREFAADIVKTEPKIDVLIHNAGMALAFRG 147
            ||:::.......||...|.|:::.|:||||...||:|.||.|.:..|..:.:||:|||:.:....
Mouse    69 CRDVDKGELAAREIQAVTGNSQVFVRKLDLADTKSIRAFAKDFLAEEKHLHLLINNAGVMMCPYS 133

  Fly   148 QTSEDGVELTMATNHYGPFLLTHLLIDVLKKSAPARIVIVASELYRLSSVNLAKLNPIGTFPAAY 212
            :|: ||.|:.:..||.|.|||||||::.||:|||:|||.::|..:.|..::...|.....:.|..
Mouse   134 KTA-DGFEMHIGVNHLGHFLLTHLLLEKLKESAPSRIVNLSSLGHHLGRIHFHNLQGEKFYSAGL 197

  Fly   213 LYYVSKFANIYFARELAKRLEGTKVTVNFLHPGMIDSGIWRNVPFPLNLPMMAITKGFFKTTKAG 277
            .|..||.|||.|.:||||||:|:.||...:|||.:.|.:.|.......|..:...  |.||.:.|
Mouse   198 AYCHSKLANILFTKELAKRLKGSGVTTYSVHPGTVHSELTRYSSIMRWLWQLFFV--FIKTPQEG 260

  Fly   278 AQTTIYLATSNEVANVSGKYFMDCKEATLNAAALDEEKGLKIWEESVKIVKLTPQD 333
            |||::|.|.:..:.::||.:|.||:.|.::....:|....::|:.|..::.| |.|
Mouse   261 AQTSLYCALTEGLESLSGSHFSDCQLAWVSYQGRNEIIARRLWDVSCDLLGL-PVD 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7675NP_650717.1 retinol-DH_like_SDR_c_like 52..320 CDD:212492 110/267 (41%)
Rdh11NP_067532.2 Rossmann-fold NAD(P)(+)-binding proteins 38..306 CDD:473865 111/270 (41%)

Return to query results.
Submit another query.