DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7675 and RDH12

DIOPT Version :9

Sequence 1:NP_001287390.1 Gene:CG7675 / 42211 FlyBaseID:FBgn0038610 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_689656.2 Gene:RDH12 / 145226 HGNCID:19977 Length:316 Species:Homo sapiens


Alignment Length:310 Identity:121/310 - (39%)
Similarity:188/310 - (60%) Gaps:6/310 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LMTSVAAIVATLM-SIRFYLRITAGRCFTETKMEGKTVIITGANSGIGKETAKDLAGRGARIIMA 82
            |:||..:.:..:. |||.:  ...|.|.|..::.||.|:|||||:|||||||::||.||||:.:|
Human     7 LLTSFFSFLYMVAPSIRKF--FAGGVCRTNVQLPGKVVVITGANTGIGKETARELASRGARVYIA 69

  Fly    83 CRNLETANAVKDEIVKETKNNKILVKKLDLGSQKSVREFAADIVKTEPKIDVLIHNAGMALAFRG 147
            ||::....:...||..:|||:::||:||||...||:|.||...:..|.::.:||:|||:.:....
Human    70 CRDVLKGESAASEIRVDTKNSQVLVRKLDLSDTKSIRAFAEGFLAEEKQLHILINNAGVMMCPYS 134

  Fly   148 QTSEDGVELTMATNHYGPFLLTHLLIDVLKKSAPARIVIVASELYRLSSVNLAKLNPIGTFPAAY 212
            :|: ||.|..:..||.|.||||:||::.||.|||||:|.|:|..:.:..:....|.....:...:
Human   135 KTA-DGFETHLGVNHLGHFLLTYLLLERLKVSAPARVVNVSSVAHHIGKIPFHDLQSEKRYSRGF 198

  Fly   213 LYYVSKFANIYFARELAKRLEGTKVTVNFLHPGMIDSGIWRNVPFPLNLPMMAITKGFFKTTKAG 277
            .|..||.||:.|.|||||||:||.||...:|||::.|.:.|:  ..|...:..:...|.||.:.|
Human   199 AYCHSKLANVLFTRELAKRLQGTGVTTYAVHPGVVRSELVRH--SSLLCLLWRLFSPFVKTAREG 261

  Fly   278 AQTTIYLATSNEVANVSGKYFMDCKEATLNAAALDEEKGLKIWEESVKIV 327
            |||:::.|.:..:..:|||||.|||...::..|.:.:...::|..|.:::
Human   262 AQTSLHCALAEGLEPLSGKYFSDCKRTWVSPRARNNKTAERLWNVSCELL 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7675NP_001287390.1 PRK06196 52..327 CDD:235736 112/274 (41%)
retinol-DH_like_SDR_c_like 52..320 CDD:212492 110/267 (41%)
RDH12NP_689656.2 retinol-DH_like_SDR_c 39..307 CDD:212495 111/270 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1208
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53570
OrthoDB 1 1.010 - - D1032903at2759
OrthoFinder 1 1.000 - - FOG0000061
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100091
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X72
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
76.730

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