DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7675 and Rdh13

DIOPT Version :9

Sequence 1:NP_001287390.1 Gene:CG7675 / 42211 FlyBaseID:FBgn0038610 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_780581.1 Gene:Rdh13 / 108841 MGIID:1918732 Length:334 Species:Mus musculus


Alignment Length:330 Identity:121/330 - (36%)
Similarity:189/330 - (57%) Gaps:28/330 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 RDIFLMTSVAAIVATLMSIRFYLRITAGRCFTETKMEGKTVIITGANSGIGKETAKDLAGRGARI 79
            |.:..::.|..::...:.::.|  :..|.|.::..:.|||||:||||:||||:||.:||.||..:
Mouse     3 RFLLPVSVVGTVIGGTVLLKDY--VAGGACPSKATIPGKTVIVTGANTGIGKQTALELAKRGGNV 65

  Fly    80 IMACRNLETANAVKDEIVKETKNNKILVKKLDLGSQKSVREFAADIVKTEPKIDVLIHNAGMALA 144
            |:|||::|.......:|..||.|.::..::|||.|.||:||||..::|.|.::|:|::||.: :.
Mouse    66 ILACRDMEKCEVAAKDIRGETLNPRVRAERLDLASLKSIREFARKVIKEEERVDILVNNAAV-MR 129

  Fly   145 FRGQTSEDGVELTMATNHYGPFLLTHLLIDVLKKSAPARIVIVASELYRLSSVNLAKLN-PIGTF 208
            ....|:|||.|:....|:.|.||||:||:|.||.|||:||:.::|..:....::...|| .:..:
Mouse   130 CPHWTTEDGFEMQFGVNYLGHFLLTNLLLDKLKASAPSRIINLSSLAHVAGHIDFEDLNWQMKKY 194

  Fly   209 PAAYLYYVSKFANIYFARELAKRLEGTKVTVNFLHPGMIDSGIWR-----NVPFPLNLPMMAITK 268
            .....|..||.|.:.|.:||:.||:|:.||||.||||:..:.:.|     |..|          .
Mouse   195 DTKAAYCQSKLAVVLFTKELSHRLQGSGVTVNALHPGVARTELGRHTGMHNSAF----------S 249

  Fly   269 GF---------FKTTKAGAQTTIYLATSNEVANVSGKYFMDCKEATLNAAALDEEKGLKIWEESV 324
            ||         ||:.:..||.:.|||.:.|:.|||||||...:|...:..|.|||...::|.||.
Mouse   250 GFMLGPFFWLLFKSPQLAAQPSTYLAVAEELENVSGKYFDGLREKAPSPEAEDEEVARRLWTESA 314

  Fly   325 KIVKL 329
            ::|.|
Mouse   315 RLVGL 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7675NP_001287390.1 PRK06196 52..327 CDD:235736 114/289 (39%)
retinol-DH_like_SDR_c_like 52..320 CDD:212492 111/282 (39%)
Rdh13NP_780581.1 NADB_Rossmann 38..313 CDD:419666 112/285 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1208
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53570
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000061
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100091
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X72
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.720

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