DRSC/TRiP Functional Genomics Resources

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Protein Alignment gl and AT1G14580

DIOPT Version :9

Sequence 1:NP_001262708.1 Gene:gl / 42210 FlyBaseID:FBgn0004618 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_001320583.1 Gene:AT1G14580 / 838020 AraportID:AT1G14580 Length:481 Species:Arabidopsis thaliana


Alignment Length:341 Identity:72/341 - (21%)
Similarity:115/341 - (33%) Gaps:74/341 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   363 TVGEKESPSPPANSSLAGYYPTGVGNQ--GYTPPHKSPTSYQAAALGLSLSAFEDEEDSNEDLDG 425
            |:....:|:...:|:.||..|.....|  ..|...:.|||..|..   .........:.|.|.:.
plant    21 TIALSSTPTFLLSSAAAGPGPNNFNRQEAAMTMVQQQPTSSVAPP---PKKRRNQPGNPNPDAEV 82

  Fly   426 DEGSSGGEMKPN--LCRLCGKTYARPSTLKTHLRTHS-------------GERPYRCP------- 468
            ...|....|..|  ||.:|.|.:.|...|:.|.|.|:             ..:.|.||       
plant    83 IALSPKTIMATNRFLCEVCNKGFQREQNLQLHRRGHNLPWKLKQKSNKEVRRKVYLCPEPSCVHH 147

  Fly   469 DCNKSFSQAANLTAHVRTHTGQKPFRCPICDRRFSQSSSVTTHMRTHSGERPYRCSSCKKSFSDS 533
            |..::......:..|.....|:|.::|..|.:|::..|....|.:| .|.:.||| .|...||..
plant   148 DPARALGDLTGIKKHYYRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTKEYRC-DCGTIFSRR 210

  Fly   534 STLTKHLRIHSGEKPYQCKLCLLRFSQSGNLNRHMRVHGNNNSSNGSNGATG--VGGESSTGSGV 596
            .:...|.           ..|.....:|.   |:..|.....::.|..||..  .||.||..|..
plant   211 DSYITHR-----------AFCDALIQESA---RNPTVSFTAMAAGGGGGARHGFYGGASSALSHN 261

  Fly   597 GGGNSLLTXQKPRSAGG----------FQHYHPPHTH-------------------HMHHQHHAH 632
            ..||:..: ..|.:|.|          |:.:.|..|:                   ..::|...:
plant   262 HFGNNPNSGFTPLAAAGYNLNRSSSDKFEDFVPQATNPNPGPTNFLMQCSPNQGLLAQNNQSLMN 326

  Fly   633 HHHHAHMGNYDYGNYS 648
            ||....:|:.:..|::
plant   327 HHGLISLGDNNNNNHN 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
glNP_001262708.1 C2H2 Zn finger 439..459 CDD:275368 7/19 (37%)
zf-C2H2 439..459 CDD:278523 7/19 (37%)
zf-H2C2_2 452..476 CDD:290200 8/43 (19%)
C2H2 Zn finger 467..487 CDD:275368 4/26 (15%)
zf-H2C2_2 479..504 CDD:290200 6/24 (25%)
zf-C2H2_8 492..570 CDD:292531 17/77 (22%)
C2H2 Zn finger 495..515 CDD:275368 5/19 (26%)
zf-H2C2_2 507..531 CDD:290200 7/23 (30%)
C2H2 Zn finger 523..543 CDD:275368 5/19 (26%)
zf-H2C2_2 536..560 CDD:290200 2/23 (9%)
C2H2 Zn finger 551..571 CDD:275368 3/19 (16%)
AT1G14580NP_001320583.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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