DRSC/TRiP Functional Genomics Resources

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Protein Alignment gl and ZKSCAN3

DIOPT Version :10

Sequence 1:NP_001262708.1 Gene:gl / 42210 FlyBaseID:FBgn0004618 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_077819.2 Gene:ZKSCAN3 / 80317 HGNCID:13853 Length:538 Species:Homo sapiens


Alignment Length:230 Identity:85/230 - (36%)
Similarity:121/230 - (52%) Gaps:19/230 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   427 EGSSGGEMKPNLCRLCGKTYARPSTLKTHLRTHSGERPYRCPDCNKSFSQAANLTAHVRTHTGQK 491
            :.::||  :.::|..|||::|:.|.|..|.|.|:||:||.|.:|.|:|..::.|..|.|.|||:|
Human   306 KNATGG--RRHICHECGKSFAQSSGLSKHRRIHTGEKPYECEECGKAFIGSSALVIHQRVHTGEK 368

  Fly   492 PFRCPICDRRFSQSSSVTTHMRTHSGERPYRCSSCKKSFSDSSTLTKHLRIHSGEKPYQCKLCLL 556
            |:.|..|.:.||.||.:..|.|||:||:||.|..|.|:||.|.:|.:|.|||:|||||||.:|..
Human   369 PYECEECGKAFSHSSDLIKHQRTHTGEKPYECDDCGKTFSQSCSLLEHHRIHTGEKPYQCSMCGK 433

  Fly   557 RFSQSGNLNRHMRVH-GNNNSSNGSNGATGVGGESSTGSGVGGGNSLLTXQKPRS----AGGFQH 616
            .|.:|.:|.||.|:| |:.|......|........|....|....|... :..||    .|..:|
Human   434 AFRRSSHLLRHQRIHTGDKNVQEPEQGEAWKSRMESQLENVETPMSYKCNECERSFTQNTGLIEH 498

  Fly   617 YHPPHTHHMHHQHHA-----------HHHHHAHMG 640
             ...||....:|.:|           ..|..:|:|
Human   499 -QKIHTGEKPYQCNACGKGFTRISYLVQHQRSHVG 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
glNP_001262708.1 COG5048 <426..571 CDD:227381 67/143 (47%)
C2H2 Zn finger 439..459 CDD:275368 9/19 (47%)
C2H2 Zn finger 467..487 CDD:275368 7/19 (37%)
C2H2 Zn finger 495..515 CDD:275368 8/19 (42%)
C2H2 Zn finger 523..543 CDD:275368 9/19 (47%)
C2H2 Zn finger 551..571 CDD:275368 8/19 (42%)
ZKSCAN3NP_077819.2 SCAN 42..154 CDD:128708
KRAB 214..274 CDD:214630
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 226..274
zf-C2H2 314..336 CDD:395048 9/21 (43%)
C2H2 Zn finger 316..336 CDD:275368 9/19 (47%)
zf-H2C2_2 329..351 CDD:463886 11/21 (52%)
zf-C2H2 342..364 CDD:395048 8/21 (38%)
C2H2 Zn finger 344..364 CDD:275368 7/19 (37%)
COG5048 <368..515 CDD:227381 56/147 (38%)
C2H2 Zn finger 372..392 CDD:275368 8/19 (42%)
C2H2 Zn finger 400..420 CDD:275368 9/19 (47%)
C2H2 Zn finger 428..448 CDD:275368 8/19 (42%)
C2H2 Zn finger 482..502 CDD:275368 4/20 (20%)
zf-C2H2 508..530 CDD:395048 3/21 (14%)
C2H2 Zn finger 510..530 CDD:275368 2/19 (11%)
Blue background indicates that the domain is not in the aligned region.

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