DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gl and LOC799968

DIOPT Version :9

Sequence 1:NP_001262708.1 Gene:gl / 42210 FlyBaseID:FBgn0004618 Length:679 Species:Drosophila melanogaster
Sequence 2:XP_001340263.4 Gene:LOC799968 / 799968 -ID:- Length:886 Species:Danio rerio


Alignment Length:727 Identity:148/727 - (20%)
Similarity:236/727 - (32%) Gaps:264/727 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 QGSTALPISSLTSSDFDCGGCFDPTIGVGVGIGGGHIQISTTPPASSGNGSSNNGAGGGSSGNH- 136
            :|.:..|::.| ||:.....|             ||....:|.|....:.|:.....|.||.|. 
Zfish   196 RGKSPPPVTPL-SSNLSVTSC-------------GHKPNQSTQPIQGTSLSTKENREGLSSQNKK 246

  Fly   137 ------GYWSTDEMA-STFP--------GLPPLDIDPLPSLFPFSPCGAS--YNFAAGNPHQAAS 184
                  ...||..:. |:.|        .:|.:.:...||: |.:....|  :...:.|||.:  
Zfish   247 QDASVPAQTSTTSVPNSSIPARTACAKLSVPMIQLSGAPSI-PQAKQSTSLVHRRPSPNPHAS-- 308

  Fly   185 LSYTV----------HPHQ------------MLISPNSH------NHGQMHSQHQQHQHQQSQ-- 219
             :.||          ||.|            ::..|.|:      .|.:..:......:|.:|  
Zfish   309 -NQTVVPQKEESDMCHPLQNTILSAVPSSQVVVAEPTSNKQRALFTHTEKSASSITSINQATQTF 372

  Fly   220 ------------VQASHVGNSLLQSSGGNNIGSNGSAGGVANAAS---CYYETSAGTAAPPPPPA 269
                        :|...:.|   |:.....:.......|:..|.|   .......||...||.|.
Zfish   373 AQCSAKLTQPPFIQPQAIKN---QAQEMTPVVHTAMPSGLVPATSSKPTQVHDRRGTNLVPPRPH 434

  Fly   270 AAMYPSMSVNVSMNMTMHHGYGAGDAGG-------VPMQCSQMNWTPPSNSTSAA-------AAA 320
            |...|.:       :..|.|..:..:..       ||......::.|...|.|::       .|:
Zfish   435 AFASPQV-------IPAHSGAHSNPSFSFPAVQPVVPTPAKPTSYLPMLVSFSSSHLPVNTIPAS 492

  Fly   321 AAVNVLYPPLLSPGHYPASATYSFTADFRAPAPTG----------LGALPPLTVGEKESP--SPP 373
            .::|...|.|....:.|.|..:|.::....|.|..          |...||:.:..:::|  :||
Zfish   493 PSLNPPQPSLTQSQYPPQSDQFSSSSSQFCPLPDNSPDLLESLDCLHLQPPIMITPQDAPDQAPP 557

  Fly   374 ANSSLAGYYPTGVGNQGYTPPHKSPTSYQAAALGLSL-------------------------SAF 413
            .:..         .:.|...|..:|...||||...::                         ...
Zfish   558 HHFQ---------SSSGQLAPLLTPKEQQAAAASANVVLGRVPARSLQTSVPLVENLPFSPHCRA 613

  Fly   414 EDEEDSNEDLDGDE---------------------------------------------GSSGG- 432
            |..:.:||||..|:                                             ||:.| 
Zfish   614 ETTDRNNEDLSDDDTPTLQSRLRKQRKLCFNSRQVDPSVKEGMIKDQLQNDLTRESQLSGSNNGC 678

  Fly   433 EMKPNL----------CRLCGKTYARPSTLKTHLRTHSGERPYRCPDCNKSFSQA---------- 477
            :..|.|          |..||:..:..|.|:.|:|.|:|||||.|..|.|:|...          
Zfish   679 QTLPKLLGKTLQRNTECPDCGRILSNASALENHMRLHTGERPYTCSQCGKAFPSVRGLNRHMKVH 743

  Fly   478 ----------------------------------------------ANLTAHVRTHTGQKPFRCP 496
                                                          |:.:.|:|.|||:|||.|.
Zfish   744 AEEKRYQCEECGKSFVYHFTLTKHQLIHSGERPFPCKVCGKRFLAKADRSTHMRMHTGEKPFSCT 808

  Fly   497 ICDRRFSQSSSVTTHMRTHSGERPYRCSSCKKSFSDSSTLTKHLRIHSGEKPYQCKLCLLRFSQS 561
            :|.:||....::..||:.|.||:.|.|..|:|.|.|.....:|..||:||:|::||.|..||:||
Zfish   809 LCGKRFKHRVALNMHMQGHRGEKRYTCPHCEKGFVDLGNFKRHKLIHTGERPFECKECGKRFTQS 873

  Fly   562 GNLNRHMRV-HG 572
            .:|.:|:.. ||
Zfish   874 AHLKKHLHTQHG 885

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
glNP_001262708.1 C2H2 Zn finger 439..459 CDD:275368 7/19 (37%)
zf-C2H2 439..459 CDD:278523 7/19 (37%)
zf-H2C2_2 452..476 CDD:290200 13/23 (57%)
C2H2 Zn finger 467..487 CDD:275368 7/75 (9%)
zf-H2C2_2 479..504 CDD:290200 12/24 (50%)
zf-C2H2_8 492..570 CDD:292531 32/77 (42%)
C2H2 Zn finger 495..515 CDD:275368 6/19 (32%)
zf-H2C2_2 507..531 CDD:290200 9/23 (39%)
C2H2 Zn finger 523..543 CDD:275368 6/19 (32%)
zf-H2C2_2 536..560 CDD:290200 11/23 (48%)
C2H2 Zn finger 551..571 CDD:275368 9/20 (45%)
LOC799968XP_001340263.4 C2H2 Zn finger 695..715 CDD:275368 7/19 (37%)
zf-H2C2_2 707..730 CDD:290200 12/22 (55%)
C2H2 Zn finger 723..743 CDD:275368 4/19 (21%)
zf-H2C2_2 736..760 CDD:290200 0/23 (0%)
C2H2 Zn finger 751..771 CDD:275368 0/19 (0%)
zf-H2C2_2 764..786 CDD:290200 0/21 (0%)
C2H2 Zn finger 779..799 CDD:275368 3/19 (16%)
zf-H2C2_2 791..816 CDD:290200 12/24 (50%)
C2H2 Zn finger 807..827 CDD:275368 6/19 (32%)
zf-H2C2_2 819..843 CDD:290200 9/23 (39%)
C2H2 Zn finger 835..855 CDD:275368 6/19 (32%)
zf-H2C2_2 847..872 CDD:290200 11/24 (46%)
C2H2 Zn finger 863..882 CDD:275368 9/18 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2374
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.030

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