DRSC/TRiP Functional Genomics Resources

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Protein Alignment gl and VEZF1

DIOPT Version :9

Sequence 1:NP_001262708.1 Gene:gl / 42210 FlyBaseID:FBgn0004618 Length:679 Species:Drosophila melanogaster
Sequence 2:XP_005257700.1 Gene:VEZF1 / 7716 HGNCID:12949 Length:527 Species:Homo sapiens


Alignment Length:352 Identity:81/352 - (23%)
Similarity:132/352 - (37%) Gaps:93/352 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   304 QMNWTP---PSNSTSAAAAAAAVNVLYPPLLSPGHYPASATYSFTADFRAPAPTGLGALPPLTVG 365
            :.|||.   .::..|.....||.|.|.|.|.|                 |..|.....|.|:.:.
Human     2 EANWTAFLFQAHEASHHQQQAAQNSLLPLLSS-----------------AVEPPDQKPLLPIPIT 49

  Fly   366 EKESPSP-------------PANSSLAGYYP----------------TGVGNQGYTPPHKSPT-- 399
            :|...:|             |..|.:..|..                ||:  :..:.|.|:||  
Human    50 QKPQGAPETLKDAIGIKKEKPKTSFVCTYCSKAFRDSYHLRRHESCHTGI--KLVSRPKKTPTTV 112

  Fly   400 ----------SYQAAALGLSLSAFEDEEDSNEDLDGDEGSSGGEM--------------KPNLCR 440
                      |.:.:.:............|:...:....:|...|              |.:.|.
Human   113 VPLISTIAGDSSRTSLVSTIAGILSTVTTSSSGTNPSSSASTTAMPVTQSVKKPSKPVKKNHACE 177

  Fly   441 LCGKTYARPSTLKTHLRTHSGERPYRCPDCNKSFSQAANLTAHVRTHTG--QKPFRCPICDRRFS 503
            :|||.:.....|..|..:||.|:|:.||.||:.|.:...:|.|||:|.|  .||:.|.:|.:.||
Human   178 MCGKAFRDVYHLNRHKLSHSDEKPFECPICNQRFKRKDRMTYHVRSHEGGITKPYTCSVCGKGFS 242

  Fly   504 QSSSVTTHMR-THSGERPYRC------SSCKKSFSDSSTLTKHLRIHSGEKPYQCKLC--LLRFS 559
            :...::.|:: .||.|||::|      .:|..:|:....|..|:..|.|:  ..|.:|  ||   
Human   243 RPDHLSCHVKHVHSTERPFKCQFSSLMQTCTAAFATKDRLRTHMVRHEGK--VSCNICGKLL--- 302

  Fly   560 QSGNLNRHMRVHGNNNSSNGSNGATGV 586
            .:..:..|::.||.:.|.|.:....|:
Human   303 SAAYITSHLKTHGQSQSINCNTCKQGI 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
glNP_001262708.1 C2H2 Zn finger 439..459 CDD:275368 6/19 (32%)
zf-C2H2 439..459 CDD:278523 6/19 (32%)
zf-H2C2_2 452..476 CDD:290200 11/23 (48%)
C2H2 Zn finger 467..487 CDD:275368 9/19 (47%)
zf-H2C2_2 479..504 CDD:290200 11/26 (42%)
zf-C2H2_8 492..570 CDD:292531 23/86 (27%)
C2H2 Zn finger 495..515 CDD:275368 5/20 (25%)
zf-H2C2_2 507..531 CDD:290200 8/30 (27%)
C2H2 Zn finger 523..543 CDD:275368 5/25 (20%)
zf-H2C2_2 536..560 CDD:290200 8/25 (32%)
C2H2 Zn finger 551..571 CDD:275368 5/21 (24%)
VEZF1XP_005257700.1 C2H2 Zn finger 76..96 CDD:275368 1/19 (5%)
C2H2 Zn finger 176..196 CDD:275368 6/19 (32%)
zf-H2C2_2 188..213 CDD:290200 11/24 (46%)
C2H2 Zn finger 204..224 CDD:275368 9/19 (47%)
C2H2 Zn finger 234..252 CDD:275368 5/17 (29%)
C2H2 Zn finger 263..289 CDD:275368 5/25 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S3992
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.860

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