Protein Alignment gl and Zscan2

DIOPT Version :10

• Sequence 1: NP_001262708.1
• Gene: gl / 42210
• FlyBaseID: FBgn0004618
• Length: 679
• Species: Drosophila melanogaster
• Sequence 2: NP_001414652.1
• Gene: Zscan2 / 683603
• RGDID: 1584548
• Length: 614
• Species: Rattus norvegicus
• Alignment Length: 310
• Identity: 109/310 - (35%)
• Similarity: 147/310 - (47%)
• Gaps: 59/310 - (19%)

  Fly   346 ADFRAPAPTG--LGALPPLTVGEKESPSPPAN---SSLAGYYPTGVGNQGYTPP----------- 394
            :||.....:|  .|.:|    ||:....|...   ..|.|...|.:|.:.|..|
  Rat   176 SDFERDCGSGGAQGNVP----GEEHRDLPSEGREVGQLIGLQGTYLGEKPYECPQCGKTFSRKSH 236

  Fly   395 -------HKSPTSYQAAALGLSLSAFEDEEDSNEDLDGDEGSSGGEMKPNLCRLCGKTYARPSTL 452
                   |.....|:....|.|.|     :.||  ....:.:..|| ||..||.|||:::|.:.|
  Rat   237 LITHERTHTGEKYYKCEECGKSFS-----DGSN--FSRHQTTHTGE-KPYKCRDCGKSFSRSANL 293

  Fly   453 KTHLRTHSGERPYRCPDCNKSFSQAANLTAHVRTHTGQKPFRCPICDRRFSQSSSVTTHMRTHSG 517
            .||.|.|:||:|::|.:|.||||::.||.||.|||||:||:.||.|.:.|...||:.||...|:|
  Rat   294 ITHQRIHTGEKPFQCAECGKSFSRSPNLIAHQRTHTGEKPYSCPECGKSFGNRSSLNTHQGIHTG 358

  Fly   518 ERPYRCSSCKKSFSDSSTLTKHLRIHSGEKPYQCKLCLLRFSQSGNLNRHMRVHG---------- 572
            |:||.|..|.:|||.:|.|.:|.|||:|||||:|..|..:||||..|..|.|.|.
  Rat   359 EKPYACKECGESFSYNSNLIRHQRIHTGEKPYKCTECGQKFSQSSALITHRRTHTGEKPYQCSEC 423

  Fly   573 NNNSSNGSNGAT-------------GVGGES-STGSGVGGGNSLLTXQKP 608
            ..:.|..||.||             ||.|:| |..|.:.....:.|.:||
  Rat   424 GKSFSRSSNLATHRRTHLVEKPYKCGVCGKSFSQSSSLIAHQGMHTGEKP 473

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
gl	NP_001262708.1	COG5048	<426..571	CDD:227381	73/144 (51%)
		C2H2 Zn finger	439..459	CDD:275368	10/19 (53%)
		C2H2 Zn finger	467..487	CDD:275368	11/19 (58%)
		C2H2 Zn finger	495..515	CDD:275368	8/19 (42%)
		C2H2 Zn finger	523..543	CDD:275368	9/19 (47%)
		C2H2 Zn finger	551..571	CDD:275368	9/19 (47%)
Zscan2	NP_001414652.1	None