DRSC/TRiP Functional Genomics Resources

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Protein Alignment gl and Zkscan14

DIOPT Version :10

Sequence 1:NP_001262708.1 Gene:gl / 42210 FlyBaseID:FBgn0004618 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_075811.2 Gene:Zkscan14 / 67235 MGIID:1914485 Length:521 Species:Mus musculus


Alignment Length:263 Identity:95/263 - (36%)
Similarity:121/263 - (46%) Gaps:72/263 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   361 PLTVG-------EKESPSPPANSSLAGYY---PTGVG---------NQGY------TPPHKSPTS 400
            ||.:|       .|.:.|..:.||:.|.:   ..|:|         .||:      ..||.|..|
Mouse   246 PLLIGVSREERDSKNNESENSGSSVLGQHIQTAEGLGTNSQCGDDHKQGFHVKCHSVKPHSSVDS 310

  Fly   401 YQAAALGLSLSAFEDEEDSNEDLDGDEGSSGGEMKPNLCRLCGKTYARPSTLKTHLRTHSGERPY 465
                |:||    .|.:....||            ||..|..|.|.:.:.|.|..|.|.|:||:||
Mouse   311 ----AVGL----LETQRQFQED------------KPYKCDSCEKGFRQRSDLFKHQRIHTGEKPY 355

  Fly   466 RCPDCNKSFSQAANLTAHVRTHTGQKPFRCPICDRRFSQSSSVTTHMRTHS-------------- 516
            :|.:|.|.|||:|.|..|.|||||:||:.||.|...|.|||.::.|.|||:              
Mouse   356 QCQECGKRFSQSAALVKHQRTHTGEKPYACPECGECFRQSSHLSRHQRTHASEKYYKCEECGEIV 420

  Fly   517 -------------GERPYRCSSCKKSFSDSSTLTKHLRIHSGEKPYQCKLCLLRFSQSGNLNRHM 568
                         |||||:|..|:|||...|.|.||.|.|:|||||.|.:|..|||||..|.:|.
Mouse   421 HVSSLFRHQRLHRGERPYKCGDCEKSFRQRSDLFKHQRTHTGEKPYACVVCGRRFSQSATLIKHQ 485

  Fly   569 RVH 571
            |.|
Mouse   486 RTH 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
glNP_001262708.1 COG5048 <426..571 CDD:227381 72/171 (42%)
C2H2 Zn finger 439..459 CDD:275368 7/19 (37%)
C2H2 Zn finger 467..487 CDD:275368 10/19 (53%)
C2H2 Zn finger 495..515 CDD:275368 9/19 (47%)
C2H2 Zn finger 523..543 CDD:275368 10/19 (53%)
C2H2 Zn finger 551..571 CDD:275368 10/19 (53%)
Zkscan14NP_075811.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..45
SCAN 40..151 CDD:128708
KRAB 135..193 CDD:214630
COG5048 <303..484 CDD:227381 80/200 (40%)
C2H2 Zn finger 329..349 CDD:275368 7/19 (37%)
C2H2 Zn finger 357..377 CDD:275368 10/19 (53%)
C2H2 Zn finger 385..405 CDD:275368 9/19 (47%)
C2H2 Zn finger 440..460 CDD:275368 10/19 (53%)
C2H2 Zn finger 468..488 CDD:275368 10/19 (53%)
zf-H2C2_2 481..505 CDD:463886 4/8 (50%)
C2H2 Zn finger 496..516 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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