DRSC/TRiP Functional Genomics Resources

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Protein Alignment gl and Zfp24

DIOPT Version :9

Sequence 1:NP_001262708.1 Gene:gl / 42210 FlyBaseID:FBgn0004618 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_001344376.1 Gene:Zfp24 / 59057 MGIID:1929704 Length:368 Species:Mus musculus


Alignment Length:200 Identity:72/200 - (36%)
Similarity:98/200 - (49%) Gaps:30/200 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   402 QAAALGL---SLSAFED-------EEDSNEDLDGDEGSSGGEMKPNL-CRLCGKTYARPSTLKTH 455
            |..|.||   .|.|.|:       |..|....|.|..:..|.:.|.. ....|:::..|.||...
Mouse   158 QEDAQGLPSSELDAVENQLKWASWELHSLRHCDDDATTENGALAPKQEMASAGESHEGPGTLNIG 222

  Fly   456 L-------------------RTHSGERPYRCPDCNKSFSQAANLTAHVRTHTGQKPFRCPICDRR 501
            :                   |..|.::.:.|.:|.|.|||.:.|..|.|.|:|:||:.|..|.:.
Mouse   223 VPQLFKYGETCFPKGRFERKRNPSRKKQHICDECGKHFSQGSALILHQRIHSGEKPYGCVECGKA 287

  Fly   502 FSQSSSVTTHMRTHSGERPYRCSSCKKSFSDSSTLTKHLRIHSGEKPYQCKLCLLRFSQSGNLNR 566
            ||:||.:..|.|.|:||:||:|..|.|:||.:|.|..|.|||:|||||:|..|...:|||.||.|
Mouse   288 FSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTGEKPYECVQCGKSYSQSSNLFR 352

  Fly   567 HMRVH 571
            |.|.|
Mouse   353 HQRRH 357

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
glNP_001262708.1 C2H2 Zn finger 439..459 CDD:275368 5/38 (13%)
zf-C2H2 439..459 CDD:278523 5/38 (13%)
zf-H2C2_2 452..476 CDD:290200 7/42 (17%)
C2H2 Zn finger 467..487 CDD:275368 9/19 (47%)
zf-H2C2_2 479..504 CDD:290200 10/24 (42%)
zf-C2H2_8 492..570 CDD:292531 39/77 (51%)
C2H2 Zn finger 495..515 CDD:275368 8/19 (42%)
zf-H2C2_2 507..531 CDD:290200 10/23 (43%)
C2H2 Zn finger 523..543 CDD:275368 9/19 (47%)
zf-H2C2_2 536..560 CDD:290200 12/23 (52%)
C2H2 Zn finger 551..571 CDD:275368 10/19 (53%)